RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 B4GALNT1Q00973 533 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 IRF9Q00978 393 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TMEM115Q12893 351 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 FGL2Q14314 439 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TTLL9Q3SXZ7 439 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 DET1Q7L5Y6 550 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 PIM3Q86V86 326 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 HEATR4Q86WZ0 1026 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 NKAPQ8N5F7 415 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 TRIML2Q8N7C3 387 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 PLA2G15Q8NCC3 412 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TNIP2Q8NFZ5 429 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 MAPK15Q8TD08 544 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 ADAMTS16Q8TE57 1224 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 KCTD4Q8WVF5 259 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 RCN3Q96D15 328 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TOE1Q96GM8 510 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 ZNF514Q96K75 400 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 SCYL1Q96KG9 808 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 EFHD1Q9BUP0 239 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 GATA5Q9BWX5 397 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 TPSD1Q9BZJ3 242 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 NMRAL1Q9HBL8 299 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TRIM39Q9HCM9 518 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 DDX18Q9NVP1 670 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 CNOT6Q9ULM6 557 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 RUVBL2Q9Y230 463 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 SH3GLB1Q9Y371 365 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TRPC5OSA6NMA1 111 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 KPNA5O15131 536 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 SLC31A1O15431 190 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 NDUFS2O75306 463 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 MTX2O75431 263 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 ZNF37AP17032 561 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 NUDT1P36639 197 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 CD97P48960 835 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 RGS4P49798 205 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 CDK3Q00526 305 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 CSHL1Q14406 222 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 INPP5AQ14642 412 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 LSM12Q3MHD2 195 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 TMEM31Q5JXX7 168 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 C6orf52Q5T4I8 152 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 IYDQ6PHW0 289 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 HACD2Q6Y1H2 254 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 LPCAT2Q7L5N7 544 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 PELI3Q8N2H9 469 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 SIDT2Q8NBJ9 832 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 CCDC97Q96F63 343 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 VPS50Q96JG6 964 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 FAR2Q96K12 515 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 SPACA7Q96KW9 195 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 ANKRD60Q9BZ19 345 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 MBNL1Q9NR56 388 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 WSB2Q9NYS7 404 aaPredicted RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 KLHL42Q9P2K6 505 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 DHRS7Q9Y394 339 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 DOCK9Q9BZ29 2069 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 BPTFQ12830 3046 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 IQCF5A8MTL0 148 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 FPGTO14772 594 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 NPHS1O60500 1241 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 CDK14O94921 469 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 ITGB6P18564 788 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 HNRNPA2B1P22626 353 aaKnown RBP15.49■□□□□ 0.07
SNX17-204ENST00000453453 SLC7A1P30825 629 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 AKT2P31751 481 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 CLCN7P51798 805 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 PGGT1BP53609 377 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 IL2P60568 153 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNX17-204ENST00000453453 KIAA0895LQ68EN5 471 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 PAQR3Q6TCH7 311 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 NAPRTQ6XQN6 538 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 MAMSTRQ6ZN01 415 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNX17-204ENST00000453453 CENPLQ8N0S6 344 aaPredicted RBP15.49■□□□□ 0.07
SNX17-204ENST00000453453 PLD6Q8N2A8 252 aaKnown RBP15.49■□□□□ 0.07
SNX17-204ENST00000453453 ZBTB2Q8N680 514 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 SMYD1Q8NB12 490 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 GOLM1Q8NBJ4 401 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 CD200R1Q8TD46 325 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 SGF29Q96ES7 293 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 RMND5BQ96G75 393 aaPredicted RBP15.49■□□□□ 0.07
SNX17-204ENST00000453453 COX14Q96I36 57 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 MAELQ96JY0 434 aaKnown RBP15.49■□□□□ 0.07
SNX17-204ENST00000453453 TEX101Q9BY14 249 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 OR2AG1Q9H205 316 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 EPHX3Q9H6B9 360 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 ITGB1BP2Q9UKP3 347 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 MED16Q9Y2X0 877 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 RNF11Q9Y3C5 154 aa15.49■□□□□ 0.07
SNX17-204ENST00000453453 A0A087WXM4 84 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 H3BSA7 217 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 CACNB4O00305 520 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 GRID2O43424 1007 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 WISP3O95389 354 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 MYCLP1P12525 358 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 DGKAP23743 735 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 TPP2P29144 1249 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms