RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TRAPPC5Q8IUR0 188 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 VRK3Q8IV63 474 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 KLHDC8AQ8IYD2 350 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 BEND7Q8N7W2 519 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 SNX31Q8N9S9 440 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 FNDC5Q8NAU1 212 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 ANKRD27Q96NW4 1050 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 OR2AG1Q9H205 316 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 DPEP2Q9H4A9 486 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 C8orf33Q9H7E9 229 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 HEBP1Q9NRV9 189 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 DNAJC11Q9NVH1 559 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 GID8Q9NWU2 228 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 MBD1Q9UIS9 605 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 ANGPTL2Q9UKU9 493 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 SCML1Q9UN30 329 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 GPR45Q9Y5Y3 372 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 PTGDR2Q9Y5Y4 395 aa10.31□□□□□ -0.76
VIPAS39-203ENST00000448935 TMEM265A0A087WTH1 108 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 LOC730098B7Z3J9 87 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 K7EQS6 105 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 PLK4O00444 970 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 MID1O15344 667 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 NDUFB5O43674 189 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 PCDH8O95206 1070 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 POU3F3P20264 500 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 ME2P23368 584 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 GDF5P43026 501 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 RPA4Q13156 261 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 LRP8Q14114 963 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 IMPG1Q17R60 797 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 PTCHD3Q3KNS1 767 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 ZNF648Q5T619 568 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 AGBL4Q5VU57 503 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 PNCKQ6P2M8 343 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 PAOXQ6QHF9 649 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 Q6ZSR9 355 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 RALGPS2Q86X27 583 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 FAM9CQ8IZT9 166 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 HDDC3Q8N4P3 179 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 HMGCLL1Q8TB92 370 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 HM13Q8TCT9 377 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 COX14Q96I36 57 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 CDRT15Q96T59 188 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 NPAS2Q99743 824 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 GABRG3Q99928 467 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 HOPXQ9BPY8 73 aaPredicted RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 C1QTNF7Q9BXJ2 289 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 CD248Q9HCU0 757 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 STX18Q9P2W9 335 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 KLQ9UEF7 1012 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 CD207Q9UJ71 328 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 CROTQ9UKG9 612 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 POMPQ9Y244 141 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 EIF3LQ9Y262 564 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 TRANK1O15050 2925 aa10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 ZFC3H1O60293 1989 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-203ENST00000448935 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ARHGEF33A8MVX0 844 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 TMEM229AB2RXF0 380 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 MANBAO00462 879 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 NR5A2O00482 541 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 TRIM38O00635 465 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 CFLARO15519 480 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LILRB5O75023 590 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SLC22A3O75751 556 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 DNTTP04053 509 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 DRD1P21728 446 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GCKP35557 465 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LTBRP36941 435 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 WASP42768 502 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SOX9P48436 509 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PSME3P61289 254 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 RPS14P62263 151 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SLC34A1Q06495 639 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 FOXM1Q08050 763 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ABRQ12979 859 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 RCN1Q15293 331 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PIGGQ5H8A4 983 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LIPJQ5W064 366 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 KIAA1161Q6NSJ0 714 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 MBOAT1Q6ZNC8 495 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 MYLK4Q86YV6 388 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 CFAP206Q8IYR0 622 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 AADATQ8N5Z0 425 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 DCBLD1Q8N8Z6 715 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 L3MBTL4Q8NA19 623 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 USP7Q93009 1102 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SPAG4Q9NPE6 437 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ATXN10Q9UBB4 475 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ZNF490Q9ULM2 529 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms