RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 OR10G6Q8NH81 332 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 ZFPM2Q8WW38 1151 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 CXorf40BQ96DE9 158 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 C19orf60Q96EN9 201 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 SNF8Q96H20 258 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 POM121Q96HA1 1249 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 INSM2Q96T92 566 aaPredicted RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 TCF12Q99081 682 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 TRIM56Q9BRZ2 755 aaKnown RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 TRIM51Q9BSJ1 452 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 EPB41L1Q9H4G0 881 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 COG4Q9H9E3 785 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 ITGB1BP2Q9UKP3 347 aa12.1□□□□□ -0.47
SSR4-205ENST00000447375 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
SSR4-205ENST00000447375 HIVEP3Q5T1R4 2406 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 EFCAB8A8MWE9 144 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 PRMT5O14744 637 aaPredicted RBP12.09□□□□□ -0.47
SSR4-205ENST00000447375 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
SSR4-205ENST00000447375 DPM1O60762 260 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 NDUFS3O75489 264 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 USP1O94782 785 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 FTH1P02794 183 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
SSR4-205ENST00000447375 ZNF28P17035 718 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 CD151P48509 253 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 TYSND1Q2T9J0 566 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 MSS51Q4VC12 460 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
SSR4-205ENST00000447375 NEPROQ6NW34 567 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 STAMBPL1Q96FJ0 436 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 EBNA1BP2Q99848 306 aaKnown RBP12.09□□□□□ -0.47
SSR4-205ENST00000447375 ERP44Q9BS26 406 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 NAT9Q9BTE0 207 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 P2RY12Q9H244 342 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 OR52A5Q9H2C5 316 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 ZNF451Q9Y4E5 1061 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 PCDHGA6Q9Y5G7 932 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 MAD1L1Q9Y6D9 718 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 FAM169AQ9Y6X4 670 aa12.09□□□□□ -0.47
SSR4-205ENST00000447375 APCP25054 2843 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 SLC5A10A0PJK1 596 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 ANKUB1A6NFN9 424 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 GOLGA8KD6RF30 607 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 GOLGA8TH3BQL2 631 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 KIF2AO00139 706 aaPredicted RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 RAD51CO43502 376 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 URI1O94763 535 aaPredicted RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 TTC4O95801 387 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 SLC35G4P0C7Q5 338 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 OGNP20774 298 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.482e-8■■■■■ 45.1
SSR4-205ENST00000447375 PDHA2P29803 388 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 ITGA8P53708 1063 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 ADARP55265 1226 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 MRPS25P82663 173 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 DHX9Q08211 1270 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 C2orf54Q08AI8 447 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 CHAF1BQ13112 559 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 ELOAQ14241 798 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 GPR18Q14330 331 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 ZNF449Q6P9G9 518 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 CILP2Q8IUL8 1156 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 PDIK1LQ8N165 341 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 NCSTNQ92542 709 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 ZNF669Q96BR6 464 aaPredicted RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 LRRC39Q96DD0 335 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 C12orf66Q96MD2 445 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 TRIM31Q9BZY9 425 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 ACSS2Q9NR19 701 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 IMP3Q9NV31 184 aaKnown RBP12.08□□□□□ -0.48
SSR4-205ENST00000447375 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
SSR4-205ENST00000447375 PDZD2O15018 2839 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
SSR4-205ENST00000447375 NDC80O14777 642 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 PFDN6O15212 129 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 UBXN7O94888 489 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 PGAM1P18669 254 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CCR7P32248 378 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CKAP4Q07065 602 aaKnown RBP12.07□□□□□ -0.48
SSR4-205ENST00000447375 FOXM1Q08050 763 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 HIF1AQ16665 826 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms