RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 TCTN2Q96GX1 697 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 FOPNLQ96NB1 174 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 LRFN5Q96NI6 719 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 ARHGAP9Q9BRR9 750 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 RAB11FIP5Q9BXF6 653 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 SPHK1Q9NYA1 384 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 CROTQ9UKG9 612 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 PCDHGA6Q9Y5G7 932 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 FAM169AQ9Y6X4 670 aa20.55■□□□□ 0.88
HNF4A-205ENST00000443598 FASNP49327 2511 aaKnown RBP20.55■□□□□ 0.88
HNF4A-205ENST00000443598 A0A0J9YY10 115 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 C21orf140B9A014 251 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 SMAPO00193 183 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 C1QL1O75973 258 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 IVDP26440 423 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 CCNFP41002 786 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 C19orf57Q0VDD7 668 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 GRB7Q14451 532 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 RAD51AP1Q96B01 352 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 SLC22A18Q96BI1 424 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 NAT9Q9BTE0 207 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 FAM117AQ9C073 453 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 KLHL42Q9P2K6 505 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 SERTAD3Q9UJW9 196 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 PLAGL1Q9UM63 463 aa20.54■□□□□ 0.88
HNF4A-205ENST00000443598 NIPSNAP2O75323 286 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 TTC4O95801 387 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 RECKO95980 971 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 PRB1P04280 392 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 NTRK1P04629 796 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 PGAM1P18669 254 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 CHRM3P20309 590 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 CD9P21926 228 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 F8A1P23610 371 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 LY6DQ14210 128 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 IZUMO3Q5VZ72 239 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 C19orf47Q8N9M1 422 aaKnown RBP20.53■□□□□ 0.88
HNF4A-205ENST00000443598 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
HNF4A-205ENST00000443598 OR2L8Q8NGY9 312 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 MAGEC3Q8TD91 643 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 C20orf96Q9NUD7 363 aaPredicted RBP20.53■□□□□ 0.88
HNF4A-205ENST00000443598 IL1RAPL1Q9NZN1 696 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 TMEM150CB9EJG8 249 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 RASGRF2O14827 1237 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 NKX2-8O15522 239 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 SFTPCP11686 197 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 PVRP15151 417 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 TCN2P20062 427 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 DR1Q01658 176 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 CDC20Q12834 499 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 MORF4L2Q15014 288 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 ZNF789Q5FWF6 425 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 BORAQ6PGQ7 559 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 ZNF517Q6ZMY9 492 aaPredicted RBP20.53■□□□□ 0.88
HNF4A-205ENST00000443598 CDHR3Q6ZTQ4 885 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 KLHL7Q8IXQ5 586 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 FAM167BQ9BTA0 163 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 GPR87Q9BY21 358 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 COMMD10Q9Y6G5 202 aa20.53■□□□□ 0.88
HNF4A-205ENST00000443598 ISM1B1AKI9 464 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 E5RI56 91 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 FKBP9O95302 570 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 MATN4O95460 622 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 C1orf105O95561 183 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 PEBP1P30086 187 aaKnown RBP20.52■□□□□ 0.88
HNF4A-205ENST00000443598 DNASE1L3Q13609 305 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 DENND6AQ8IWF6 608 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 RAB42Q8N4Z0 105 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 ZBTB2Q8N680 514 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 EXD3Q8N9H8 876 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 LINC01555Q8NAE3 123 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 OR1L3Q8NH93 324 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 GABPB2Q8TAK5 448 aaPredicted RBP20.52■□□□□ 0.88
HNF4A-205ENST00000443598 SKA2Q8WVK7 121 aaPredicted RBP20.52■□□□□ 0.88
HNF4A-205ENST00000443598 RNF31Q96EP0 1072 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 EBNA1BP2Q99848 306 aaKnown RBP20.52■□□□□ 0.88
HNF4A-205ENST00000443598 CCDC68Q9H2F9 335 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 SLC39A10Q9ULF5 831 aa20.52■□□□□ 0.88
HNF4A-205ENST00000443598 PCM1Q15154 2024 aa20.52■□□□□ 0.87
HNF4A-205ENST00000443598 CFAP46Q8IYW2 2715 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 KLK3P07288 261 aaPredicted RBP20.51■□□□□ 0.87
HNF4A-205ENST00000443598 SLC1A2P43004 574 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 ITGA1P56199 1179 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 DHX9Q08211 1270 aaKnown RBP20.51■□□□□ 0.87
HNF4A-205ENST00000443598 CTBP1Q13363 440 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 CRYMQ14894 314 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 TRIM73Q86UV7 250 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 ZNF843Q8N446 348 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 HMGCLL1Q8TB92 370 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 CT55Q8WUE5 264 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 KCNJ9Q92806 393 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 SEMA4CQ9C0C4 833 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 KLHL25Q9H0H3 589 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 NFS1Q9Y697 457 aa20.51■□□□□ 0.87
HNF4A-205ENST00000443598 HBQ1P09105 142 aa20.5■□□□□ 0.87
HNF4A-205ENST00000443598 CYP2A7P20853 494 aa20.5■□□□□ 0.87
HNF4A-205ENST00000443598 GABRA4P48169 554 aa20.5■□□□□ 0.87
HNF4A-205ENST00000443598 CLCN7P51798 805 aa20.5■□□□□ 0.87
HNF4A-205ENST00000443598 ZIC1Q15915 447 aa20.5■□□□□ 0.87
HNF4A-205ENST00000443598 TTLL9Q3SXZ7 439 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms