RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 COPG1Q9Y678 874 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TCRBV3S1A0A5B6 114 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UBFD1O14562 309 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC30A4O14863 429 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM13O60858 407 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SMIM24O75264 130 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 KATNA1O75449 491 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SERPIND1P05546 499 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 APOA4P06727 396 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT1A6P19224 532 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CDH3P22223 829 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT1A1P22309 533 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT1A4P22310 534 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RPL10P27635 214 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT1A3P35503 534 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT1A5P35504 534 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ERFP50548 548 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RPS6KA3P51812 740 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHN2P52757 468 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 METAP1P53582 386 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TXNL4AP83876 142 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CTBSQ01459 385 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TTLL9Q3SXZ7 439 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARL13AQ5H913 290 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM198Q66K66 360 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 LIPIQ6XZB0 460 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRRTM4Q86VH4 590 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RAVER1Q8IY67 606 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CFAP206Q8IYR0 622 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PGAM4Q8N0Y7 254 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 EZH1Q92800 747 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 HIC2Q96JB3 615 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UBXN10Q96LJ8 280 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 MEAF6Q9HAF1 191 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PISDQ9UG56 409 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CLCA2Q9UQC9 943 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PCDHB3Q9Y5E6 796 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 COMMD3-BMI1R4GMX3 469 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 C15orf38-AP3S2A0A0A6YYH1 394 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 HEATR9A2RTY3 570 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CAPN8A6NHC0 703 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ISM1B1AKI9 464 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 HDAC3O15379 428 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TNFSF14O43557 240 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 LATO43561 262 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 HYAL3O43820 417 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAFKO60675 156 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 COL6A2P12110 1019 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHRNA4P43681 627 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ALDH3B2P48448 385 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 POLD2P49005 469 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SEPHS1P49903 392 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ASPHQ12797 758 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CNSTQ6PJW8 725 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM207Q6UWW9 146 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARPINQ7Z6K5 226 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 C2CD4AQ8NCU7 369 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 DEPDC7Q96QD5 511 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CMKLR1Q99788 373 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 EGFL8Q99944 293 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PKP2Q99959 881 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZSCAN5AQ9BUG6 496 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF711Q9Y462 761 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAGEB16A2A368 324 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 GIPC1O14908 333 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PLRG1O43660 514 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 NPHS1O60500 1241 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 KCNK5O95279 499 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PAPSS2O95340 614 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 PRAMEF1O95521 474 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 S100BP04271 92 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 MMP2P08253 660 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 MC4RP32245 332 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 NPY2RP49146 381 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 NFATC4Q14934 902 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC9B2Q86UD5 537 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TSPAN33Q86UF1 283 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RASGRP3Q8IV61 690 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM217AQ8IXS0 508 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARL14Q8N4G2 192 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 AVL9Q8NBF6 648 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 DENND6BQ8NEG7 585 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM110BQ8TC76 370 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 BRSK1Q8TDC3 778 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 FATE1Q969F0 183 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SCRN2Q96FV2 425 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CAMK1GQ96NX5 476 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 SHCBP1LQ9BZQ2 653 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RHOJQ9H4E5 214 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 NOL6Q9H6R4 1146 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 IL21RQ9HBE5 538 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 RDH14Q9HBH5 336 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 TCF7L2Q9NQB0 619 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ACSS2Q9NR19 701 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 UTP6Q9NYH9 597 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 ANGPTL3Q9Y5C1 460 aa7.22□□□□□ -1.25
CDC42BPA-208ENST00000442054 CEPT1Q9Y6K0 416 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms