RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ANAPC5Q9UJX4 755 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 ZCWPW2A0A1B0GU75 182 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 CDC14CA4D256 554 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 MATN2O00339 956 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 MSL3P1P0C860 447 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 NR1D1P20393 614 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 FMO4P31512 558 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 MAGEA3P43357 314 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 CCR10P46092 362 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 YBX1P67809 324 aaKnown RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 GBX1Q14549 363 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 TYSND1Q2T9J0 566 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 PTCHD3Q3KNS1 767 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 TAX1BP1Q86VP1 789 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 DSELQ8IZU8 1212 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 NAT8LQ8N9F0 302 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 C19orf47Q8N9M1 422 aaKnown RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 ASZ1Q8WWH4 475 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 MR1Q95460 341 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 SERPINB12Q96P63 405 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 TTC1Q99614 292 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 SLC30A3Q99726 388 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 TRIM4Q9C037 500 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 SLC25A18Q9H1K4 315 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF71Q9NQZ8 489 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 POLG2Q9UHN1 485 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
SMPD4-204ENST00000430682 SNX12Q9UMY4 172 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.48
SMPD4-204ENST00000430682 MEN1O00255 615 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PGRMC1O00264 195 aaKnown RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 FANCGO15287 622 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 SUV39H1O43463 412 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 SLC28A2O43868 658 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PRICKLE3O43900 615 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PHF2O75151 1096 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 NDUFS3O75489 264 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 BANF1O75531 89 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 DNAJB5O75953 348 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 S1PR4O95977 384 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 MT-ND3P03897 115 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 CBSLP0DN79 551 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 CBSP35520 551 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 BDKRB1P46663 353 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 FOXL2P58012 376 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 ANKRD20A4Q4UJ75 823 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PTRHD1Q6GMV3 140 aaKnown RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF549Q6P9A3 640 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 FAM198BQ6UWH4 519 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 DENND6AQ8IWF6 608 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 DNAJC22Q8N4W6 341 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 OR8K5Q8NH50 307 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 ABHD17AQ96GS6 310 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 TRIM55Q9BYV6 548 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 ADNPQ9H2P0 1102 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-204ENST00000430682 OR6C2Q9NZP2 312 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 MED16Q9Y2X0 877 aa12.07□□□□□ -0.48
SMPD4-204ENST00000430682 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 A0A0J9YY10 115 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 FAM237BA0A1B0GVD1 139 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ISM1B1AKI9 464 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 C21orf140B9A014 251 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 J3QKU1 62 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ZNF749O43361 778 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 NRDCO43847 1150 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 NRP2O60462 931 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 C1orf105O95561 183 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PDGFAP04085 211 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 APOA4P06727 396 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 MAGP20916 626 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 CD9P21926 228 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PSMB5P28074 263 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PTPN4P29074 926 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PPARGP37231 505 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-204ENST00000430682 PTGIRP43119 386 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 GCGRP47871 477 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 RAB28P51157 221 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 MC1RQ01726 317 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 CHAF1BQ13112 559 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 CTBP1Q13363 440 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 ACSBG2Q5FVE4 666 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 CPZQ66K79 652 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 FCRL6Q6DN72 434 aa12.06□□□□□ -0.48
SMPD4-204ENST00000430682 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms