RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 OR2A14Q96R47 310 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 TCF12Q99081 682 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 EBNA1BP2Q99848 306 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ZPBPQ9BS86 351 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PITPNM3Q9BZ71 974 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 DPH5Q9H2P9 285 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 FGF21Q9NSA1 209 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 INTS10Q9NVR2 710 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 POLG2Q9UHN1 485 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 LNPEPQ9UIQ6 1025 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 TMEM184BQ9Y519 407 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 FAM169AQ9Y6X4 670 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 ATRXP46100 2492 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 RAD51CO43502 376 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 SPAG6O75602 509 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 HAUS5O94927 633 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 ADARP55265 1226 aaKnown RBP13.18□□□□□ -0.3
SNX3-204ENST00000426155 GBX1Q14549 363 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 IL11RAQ14626 422 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 MORF4L2Q15014 288 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 ZIC1Q15915 447 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 DEFB110Q30KQ9 67 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 SOWAHCQ53LP3 525 aaPredicted RBP13.18□□□□□ -0.3
SNX3-204ENST00000426155 PLEKHS1Q5SXH7 462 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 PRAMEF17Q5VTA0 474 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 UNC5DQ6UXZ4 953 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 KMT5CQ86Y97 462 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 ANKMY2Q8IV38 441 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 DCUN1D3Q8IWE4 304 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 ZNF501Q96CX3 271 aaPredicted RBP13.18□□□□□ -0.3
SNX3-204ENST00000426155 TRAPPC9Q96Q05 1148 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 NDNQ99608 321 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 PDE7BQ9NP56 450 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 C1GALT1Q9NS00 363 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 RARRES3Q9UL19 164 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 BTRCQ9Y297 605 aa13.18□□□□□ -0.3
SNX3-204ENST00000426155 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
SNX3-204ENST00000426155 E5RI56 91 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 MATN2O00339 956 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 PFDN6O15212 129 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 HCRTR1O43613 425 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 C1orf105O95561 183 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 NTRK1P04629 796 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 RAB28P51157 221 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 CLCN7P51798 805 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 ACY1Q03154 408 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 HIF1AQ16665 826 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 KYNUQ16719 465 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNX3-204ENST00000426155 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
SNX3-204ENST00000426155 TRMT10BQ6PF06 316 aaKnown RBP13.17□□□□□ -0.3
SNX3-204ENST00000426155 CDHR3Q6ZTQ4 885 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
SNX3-204ENST00000426155 CERS2Q96G23 380 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 TWSG1Q9GZX9 223 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 AKIRIN1Q9H9L7 192 aaPredicted RBP13.17□□□□□ -0.3
SNX3-204ENST00000426155 FAM60AQ9NP50 221 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 KLHL20Q9Y2M5 609 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 TEX264Q9Y6I9 313 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
SNX3-204ENST00000426155 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 TMEM150CB9EJG8 249 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 H3BMM5 538 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 KPNA5O15131 536 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 PRB1P04280 392 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 CTSBP07858 339 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 F8A1P23610 371 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 PSMB5P28074 263 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 GABRB3P28472 473 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 STAT5AP42229 794 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 PGGT1BP53609 377 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 TUBB4BP68371 445 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 TUBB2AQ13885 445 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 SPANXN3Q5MJ09 141 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 ATP1A1-AS1Q5TC04 95 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 CARFQ8N187 725 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 C19orf47Q8N9M1 422 aaKnown RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 SLC38A9Q8NBW4 561 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 C2CD4AQ8NCU7 369 aaPredicted RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 OR1L3Q8NH93 324 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 TTC9Q92623 222 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms