RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ITGA1P56199 1179 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 TLE1Q04724 770 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 TPSAB1Q15661 275 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 PTCHD3Q3KNS1 767 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 LACTB2Q53H82 288 aaPredicted RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 AARS2Q5JTZ9 985 aaKnown RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 ZNF385CQ66K41 422 aaPredicted RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 APLFQ8IW19 511 aaPredicted RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 SYTL1Q8IYJ3 562 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 ENDOVQ8N8Q3 282 aaKnown RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 CFAP61Q8NHU2 1237 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 TCTN2Q96GX1 697 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 MS4A14Q96JA4 679 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 NLNQ9BYT8 704 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 CHRNA10Q9GZZ6 450 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 SPRTNQ9H040 489 aaPredicted RBP17.82■□□□□ 0.44
NUP50-207ENST00000424634 EPN3Q9H201 632 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 HOMER3Q9NSC5 361 aa17.82■□□□□ 0.44
NUP50-207ENST00000424634 A0A0J9YY10 115 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 ISM1B1AKI9 464 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 GOLGA8KD6RF30 607 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 E7EQ34 232 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 GOLGA8TH3BQL2 631 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 AP3B1O00203 1094 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 VAPBO95292 243 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 APOA4P06727 396 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 RAB40ALP0C0E4 278 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 PKLRP30613 574 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 VPS41P49754 854 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 CDK16Q00536 496 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 KCNJ11Q14654 390 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 DEFB110Q30KQ9 67 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 PTRHD1Q6GMV3 140 aaKnown RBP17.81■□□□□ 0.44
NUP50-207ENST00000424634 FAM198BQ6UWH4 519 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 HOOK3Q86VS8 718 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 MPP5Q8N3R9 675 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 RASGEF1CQ8N431 466 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 DNAJC22Q8N4W6 341 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 C2orf73Q8N5S3 287 aaPredicted RBP17.81■□□□□ 0.44
NUP50-207ENST00000424634 ADAMTS17Q8TE56 1095 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 IL17FQ96PD4 163 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 TSSK1BQ9BXA7 367 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 MRM3Q9HC36 420 aaKnown RBP17.81■□□□□ 0.44
NUP50-207ENST00000424634 TCFL5Q9UL49 500 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 SOX13Q9UN79 622 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 KLHL20Q9Y2M5 609 aa17.81■□□□□ 0.44
NUP50-207ENST00000424634 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.8■□□□□ 0.44
NUP50-207ENST00000424634 MKRN2OSH3BPM6 223 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 NDUFS3O75489 264 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 RFPL1O75677 317 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 PDGFAP04085 211 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 RPS3P23396 243 aaKnown RBP eCLIP17.8■□□□□ 0.44
NUP50-207ENST00000424634 CASRP41180 1078 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 MAGEA6P43360 314 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 RAB28P51157 221 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 GPS1Q13098 491 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 CHAF1BQ13112 559 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 KIR2DS3Q14952 304 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 SLC5A12Q1EHB4 618 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 CTSL3PQ5NE16 218 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 ANKRD22Q5VYY1 191 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 CPZQ66K79 652 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 TCTN3Q6NUS6 607 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 CAND1Q86VP6 1230 aaKnown RBP17.8■□□□□ 0.44
NUP50-207ENST00000424634 THAP4Q8WY91 577 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 SEC14L1Q92503 715 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 BIRC8Q96P09 236 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 TRIM56Q9BRZ2 755 aaKnown RBP17.8■□□□□ 0.44
NUP50-207ENST00000424634 ANAPC2Q9UJX6 822 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 COL12A1Q99715 3063 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 PCSK5Q92824 1860 aa17.8■□□□□ 0.44
NUP50-207ENST00000424634 OR2B3O76000 313 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 KRT14P02533 472 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 CBSLP0DN79 551 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 CD9P21926 228 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 CBSP35520 551 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 EIF3BP55884 814 aaKnown RBP17.79■□□□□ 0.44
NUP50-207ENST00000424634 CCSMST1Q4G0I0 132 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 UNC5DQ6UXZ4 953 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 DCUN1D3Q8IWE4 304 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 GNPTGQ9UJJ9 305 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 SNX7Q9UNH6 387 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 NEU2Q9Y3R4 380 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 JRKLQ9Y4A0 524 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 NFS1Q9Y697 457 aa17.79■□□□□ 0.44
NUP50-207ENST00000424634 ANKRD12Q6UB98 2062 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 KRT87PA6NCN2 255 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 ARGFXA6NJG6 315 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 KDM1AO60341 852 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 HBQ1P09105 142 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 FMO4P31512 558 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 PTGIRP43119 386 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 TYSND1Q2T9J0 566 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 ASB18Q6ZVZ8 466 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 TAX1BP1Q86VP1 789 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 LRRC6Q86X45 466 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 REXO1L1PQ8IX06 675 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 GPR135Q8IZ08 494 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 LPGAT1Q92604 370 aa17.78■□□□□ 0.44
NUP50-207ENST00000424634 N4BP2L2Q92802 583 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms