RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZIC1Q15915 447 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 ZNF385CQ66K41 422 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 LDB1Q86U70 411 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 MPP5Q8N3R9 675 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 LKAAEAR1Q8TD35 194 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 SLC22A18Q96BI1 424 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 PANX3Q96QZ0 392 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 DHRS4Q9BTZ2 278 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 SLC25A23Q9BV35 468 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 TREX1Q9NSU2 369 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 ASH1LQ9NR48 2969 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 SNRNP200O75643 2136 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 IQCF5A8MTL0 148 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 H3BMH7 237 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 KPNA5O15131 536 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CEP104O60308 925 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 NDUFS3O75489 264 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 TMEM63AO94886 807 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 SLCO2B1O94956 709 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CD63P08962 238 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 RPS3P23396 243 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 AOAHP28039 575 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PKLRP30613 574 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PTGIRP43119 386 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CDK16Q00536 496 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CHAF1BQ13112 559 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 IGFBP7Q16270 282 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CPZQ66K79 652 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 RHBDD2Q6NTF9 364 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 TLDC1Q6P9B6 456 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 UNC5DQ6UXZ4 953 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 LRRC6Q86X45 466 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 VRK3Q8IV63 474 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 DCUN1D3Q8IWE4 304 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 LRRC8AQ8IWT6 810 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 KRT222Q8N1A0 295 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 DNAJC22Q8N4W6 341 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 CFAP61Q8NHU2 1237 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 GSDMBQ8TAX9 411 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PROKR1Q8TCW9 393 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 SPRTNQ9H040 489 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 MRM3Q9HC36 420 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 MARCH4Q9P2E8 410 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 GNPTGQ9UJJ9 305 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 SRPK3Q9UPE1 567 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PLCL2Q9UPR0 1127 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PCDHGB7Q9Y5F8 929 aa16.96■□□□□ 0.31
PDLIM2-208ENST00000416159 PDGFAP04085 211 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 CBSLP0DN79 551 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 TPSB2P20231 275 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 NMBRP28336 390 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 PEBP1P30086 187 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 CBSP35520 551 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 KCNJ1P48048 391 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 PGDP52209 483 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 CRADDP78560 199 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 TPSAB1Q15661 275 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 DEFB110Q30KQ9 67 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 COLEC12Q5KU26 742 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 LRRC8BQ6P9F7 803 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 TTC23LQ6PF05 361 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 MED25Q71SY5 747 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 RAB43Q86YS6 212 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 TMEM102Q8N9M5 508 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 KIFC1Q9BW19 673 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 P2RY12Q9H244 342 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 MLXIPLQ9NP71 852 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 GPN3Q9UHW5 284 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 G3BP2Q9UN86 482 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 MRFAP1Q9Y605 127 aa16.95■□□□□ 0.3
PDLIM2-208ENST00000416159 NRDCO43847 1150 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 S1PR4O95977 384 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 CD9P21926 228 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 RRADP55042 308 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 DCDP81605 110 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 SARNPP82979 210 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 MLIPQ5VWP3 458 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 PAPD7Q5XG87 772 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 SDCCAG8Q86SQ7 713 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 ZBTB2Q8N680 514 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 OR2L8Q8NGY9 312 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 GBP5Q96PP8 586 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 MENTQ9BUN1 341 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 RAB11FIP5Q9BXF6 653 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 TXLNGQ9NUQ3 528 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 INTS7Q9NVH2 962 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 IRAK4Q9NWZ3 460 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 SLC39A10Q9ULF5 831 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 ZNF451Q9Y4E5 1061 aa16.94■□□□□ 0.3
PDLIM2-208ENST00000416159 FER1L5A0AVI2 2057 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 CCDC88CQ9P219 2028 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 RASGRF2O14827 1237 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 PFDN6O15212 129 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 ZSCAN9O15535 394 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 HCRTR1O43613 425 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms