RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PCDH11YQ9BZA8 1340 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 A0A1W2PRV1 198 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 FAM90A10PA6NDY2 464 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 C5orf52A6NGY3 159 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 DUXAA6NLW8 204 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SRRM3A6NNA2 597 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 YDJCA8MPS7 323 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PPIP5K2O43314 1243 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SELENOFO60613 162 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 WDPCPO95876 746 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 GSRP00390 522 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SPP1P10451 314 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 HAPLN1P10915 354 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ITIH1P19827 911 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PSMB4P28070 264 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PTGER4P35408 488 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 IL15P40933 162 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 RGS7P49802 495 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PDLIM4P50479 330 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 MTCP1P56278 107 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 GSDMDP57764 484 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SEC61A1P61619 476 aaKnown RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 CX3CL1P78423 397 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 MORF4L2Q15014 288 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC39A14Q15043 492 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PHLDA2Q53GA4 152 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 LACTB2Q53H82 288 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 CREB3L2Q70SY1 520 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ZNF441Q8N8Z8 693 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 TRIML1Q8N9V2 468 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 DBF4BQ8NFT6 615 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PROX1Q92786 737 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 DHX58Q96C10 678 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ABHD8Q96I13 439 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ZNF48Q96MX3 618 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 POLR3CQ9BUI4 534 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ACAT2Q9BWD1 397 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 PRRG4Q9BZD6 226 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 TMEM206Q9H813 350 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 TRPV4Q9HBA0 871 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 TUFT1Q9NNX1 390 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 IL1RAPL2Q9NP60 686 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 OLFML3Q9NRN5 406 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 GKN1Q9NS71 199 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC38A7Q9NVC3 462 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 CNIH4Q9P003 139 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 VPS18Q9P253 973 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 LRWD1Q9UFC0 647 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 JRKLQ9Y4A0 524 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 ABCC9O60706 1549 aa4.51□□□□□ -1.69
HMGB3P31-201ENST00000413333 A0A1W2PRB8 838 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 SMIM30A4D0T7 59 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 MYMKA6NI61 221 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 C4orf47A7E2U8 309 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 E9PI62 339 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 GAPDHSO14556 408 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC30A4O14863 429 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC28A2O43868 658 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 KINO60870 393 aaKnown RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 FCGR3BO75015 233 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 HMOX1P09601 288 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 THEGLP0DJG4 465 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 TGFB3P10600 412 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 MNDAP41218 407 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 GMPSP49915 693 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 ALDH3A2P51648 485 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 THOP1P52888 689 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 PDX1P52945 283 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 ST8SIA6P61647 398 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 MAT1AQ00266 395 aaKnown RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 MBTD1Q05BQ5 628 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 SNTA1Q13424 505 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 CDO1Q16878 200 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 CTU2Q2VPK5 515 aaKnown RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC27A1Q6PCB7 646 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 TMEM270Q6UE05 265 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 ZNF517Q6ZMY9 492 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 C15orf39Q6ZRI6 1047 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 C4orf19Q8IY42 314 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 LILRB1Q8NHL6 650 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 FGFBP3Q8TAT2 258 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 ELP5Q8TE02 316 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 RIT1Q92963 219 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 PHF21BQ96EK2 531 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 CACNG6Q9BXT2 260 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 S1PR5Q9H228 398 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 GAREM1Q9H706 876 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 LMAN1LQ9HAT1 526 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 RAB9BQ9NP90 201 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 RNF7Q9UBF6 113 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 KNSTRNQ9Y448 316 aa4.5□□□□□ -1.69
HMGB3P31-201ENST00000413333 ACEP12821 1306 aa4.49□□□□□ -1.69
HMGB3P31-201ENST00000413333 CGNL1Q0VF96 1302 aa4.49□□□□□ -1.69
HMGB3P31-201ENST00000413333 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
HMGB3P31-201ENST00000413333 PRR32B1ATL7 298 aa4.49□□□□□ -1.69
HMGB3P31-201ENST00000413333 DDX39AO00148 427 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms