RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SNX4O95219 450 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 AHSGP02765 367 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 PRR23CQ6ZRP0 262 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 AKAP11Q9UKA4 1901 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 IQCF5A8MTL0 148 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 PAPSS2O95340 614 aaPredicted RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 PAFAH1B3Q15102 231 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 ADGRG6Q86SQ4 1221 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 KLHL6Q8WZ60 621 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 FKBPLQ9UIM3 349 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 CLEC4AQ9UMR7 237 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 TAF8Q7Z7C8 310 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 TSPEARQ8WU66 669 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 DNASE1L2Q92874 299 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 C7P10643 843 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 TARDBPQ13148 414 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNED1-205ENST00000405547 SOWAHAQ2M3V2 549 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 ATAD1Q8NBU5 361 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 DDX1Q92499 740 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 RP1P56715 2156 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 M0QX08 132 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 IRAK2O43187 625 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 DNAJB5O75953 348 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SERPINA3P01011 423 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 KELP23276 732 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 OR14I1A6ND48 311 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 PI15O43692 258 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 PEPDP12955 493 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 JAZF1Q86VZ6 243 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 PYURFQ96I23 114 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ECI2O75521 394 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 SMYD5Q6GMV2 418 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 LINGO4Q6UY18 593 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 OR8H3Q8N146 312 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 OR10G2Q8NGC3 310 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 SPACA7Q96KW9 195 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 MGME1Q9BQP7 344 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 MED11Q9P086 117 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 GLDCP23378 1020 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 FKBP1BP68106 108 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 GPR33Q49SQ1 333 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 SPIN4Q56A73 249 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 COLEC12Q5KU26 742 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 RBM20Q5T481 1227 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 ZNF517Q6ZMY9 492 aaPredicted RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 XKP51811 444 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 CYP2U1Q7Z449 544 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 GLIS1Q8NBF1 620 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ZNF354BQ96LW1 612 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 VPS29Q9UBQ0 182 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 C5P01031 1676 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 MARVELD2Q8N4S9 558 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 HCN1O60741 890 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ATP4BP51164 291 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 LINC00471Q8N535 108 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 SLC35F5Q8WV83 523 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 CDKN2AIPNLQ96HQ2 116 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 TRNT1Q96Q11 434 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
SNED1-205ENST00000405547 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
SNED1-205ENST00000405547 C4AP0C0L4 1744 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 C4BP0C0L5 1744 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms