RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ATAD5Q96QE3 1844 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 LOC102723996A0A087X1L8 192 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 SAA2-SAA4A0A096LPE2 208 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM178BH3BS89 294 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 PLK4O00444 970 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZBTB43O43298 467 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 LDB3O75112 727 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 WISP2O76076 250 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZWINTO95229 277 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 PCP11498 1178 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 KCNA5P22460 613 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 PSMA5P28066 241 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 GNL1P36915 607 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 BTDP43251 543 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 DYNLL1P63167 89 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 IMMTQ16891 758 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 SBK1Q52WX2 424 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 APOBEC3HQ6NTF7 200 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMCO3Q6UWJ1 677 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF517Q6ZMY9 492 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 TPRG1Q6ZUI0 275 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 DNAAF5Q86Y56 855 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 GPC2Q8N158 579 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 SLC5A8Q8N695 610 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 C9orf106Q8NAJ2 232 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZBED3Q96IU2 234 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 CDRT15Q96T59 188 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 IDI2Q9BXS1 227 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 RTN4RQ9BZR6 473 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 NAPBQ9H115 298 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 OSGEPL1Q9H4B0 414 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 TRMT1Q9NXH9 659 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 AATFQ9NY61 560 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 NKIRAS2Q9NYR9 191 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 HACL1Q9UJ83 578 aa4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 RALYQ9UKM9 306 aaKnown RBP4.79□□□□□ -1.64
HMGB3P19-201ENST00000403971 ROBO3Q96MS0 1386 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 WDR19Q8NEZ3 1342 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 PASKQ96RG2 1323 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 PLSCR5A0PG75 271 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 MAGEA13PA6NCF6 341 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 GLOD5A6NK44 160 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 CLGNO14967 610 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 BCL10O95999 233 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 DAOP14920 347 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 POLR2CP19387 275 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 EEF1A2Q05639 463 aaKnown RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 KRT33BQ14525 404 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 FAM98BQ52LJ0 330 aaKnown RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 C12orf60Q5U649 245 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 GARNL3Q5VVW2 1013 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 KRT79Q5XKE5 535 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ALS2CLQ60I27 953 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 CDC42EP5Q6NZY7 148 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ASB18Q6ZVZ8 466 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 Q75L30 129 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 MEPCEQ7L2J0 689 aaKnown RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 FBXL16Q8N461 479 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 GCSAMQ8N6F7 178 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 OR52I2Q8NH67 350 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 SPATA20Q8TB22 786 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMCO6Q96DC7 493 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ERP27Q96DN0 273 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 CDCA5Q96FF9 252 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 DACH2Q96NX9 599 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 SERINC2Q96SA4 455 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 APOL6Q9BWW8 343 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 C1QTNF4Q9BXJ3 329 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ALDH8A1Q9H2A2 487 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 SEMA6AQ9H2E6 1030 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 LRMDAQ9H2I8 198 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 RNF41Q9H4P4 317 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 CPSF2Q9P2I0 782 aaKnown RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 LARSQ9P2J5 1176 aaKnown RBP4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 POLG2Q9UHN1 485 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF148Q9UQR1 794 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 TTLL3Q9Y4R7 772 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 PCDHGB1Q9Y5G3 927 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 FAM169AQ9Y6X4 670 aa4.78□□□□□ -1.64
HMGB3P19-201ENST00000403971 TRPM7Q96QT4 1865 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 FLT1P17948 1338 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF541Q9H0D2 1346 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 OR5K3A6NET4 321 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLC16A5O15375 505 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 TIMM44O43615 452 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 PRKAB2O43741 272 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 DNTTP04053 509 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 CDH1P12830 882 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 IL11P20809 199 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 CCKARP32238 428 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 ANP32AP39687 249 aaKnown RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 TDO2P48775 406 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms