RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 H2AFY2Q9P0M6 372 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNHIT2Q9UHR6 403 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CDC14AQ9UNH5 594 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 DMTF1Q9Y222 760 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OAS3Q9Y6K5 1087 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SUV39H1O43463 412 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NUAK1O60285 661 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 STX11O75558 287 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 INHBCP55103 352 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM214AQ32MH5 1076 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 C16orf46Q6P387 395 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RIPOR1Q6ZS17 1223 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 Q6ZVU0 165 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DHRSXQ8N5I4 330 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TFGQ92734 400 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 AHCYL2Q96HN2 611 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HIC2Q96JB3 615 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CLPTM1LQ96KA5 538 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DDX18Q9NVP1 670 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF490Q9ULM2 529 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FCF1Q9Y324 198 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PCDHB11Q9Y5F2 797 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM72CH0Y354 149 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PLK4O00444 970 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DLX3O60479 287 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PEX11AO75192 247 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NDUFS2O75306 463 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 MANFP55145 182 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RCAN2Q14206 197 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM259Q4ZIN3 620 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM72AQ5TYM5 149 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM72DQ6L9T8 149 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GALNT18Q6P9A2 607 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SVOPLQ8N434 492 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM13CQ8NE31 585 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OR6K2Q8NGY2 324 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM136AQ96C01 138 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RBM18Q96H35 190 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NTMT1Q9BV86 223 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZBP1Q9H171 429 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IL26Q9NPH9 171 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OSER1Q9NX31 292 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ATP6V1HQ9UI12 483 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GGT7Q9UJ14 662 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RAB23Q9ULC3 237 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CFL2Q9Y281 166 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PSAT1Q9Y617 370 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ANKRD65E5RJM6 399 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 UBXN8O00124 270 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HTRA2O43464 458 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SERPIND1P05546 499 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ACPPP15309 386 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PAICSP22234 425 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GRIA1P42261 906 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CHRNA4P43681 627 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ST13P50502 369 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RPS14P62263 151 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SGO1Q5FBB7 561 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZC3H12BQ5HYM0 836 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 C7orf61Q8IZ16 206 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OR9A1PQ8NGU1 263 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SPATA7Q9P0W8 599 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 THADAQ6YHU6 1953 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM265A0A087WTH1 108 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ZSCAN9O15535 394 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HS6ST1O60243 411 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CNTN5O94779 1100 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SEMA3DO95025 777 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TCN1P20061 433 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 VARSP26640 1264 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GDI1P31150 447 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 S100A5P33763 92 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SSR2P43308 183 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RAB15P59190 212 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TRAF2Q12933 501 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TRIM32Q13049 653 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FAM174BQ3ZCQ3 159 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TMPRSS11BQ86T26 416 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SFRP1Q8N474 314 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ADAMTS18Q8TE60 1221 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 IGSF8Q969P0 613 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PELOQ9BRX2 385 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SLC12A9Q9BXP2 914 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HPS4Q9NQG7 708 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SLC7A8Q9UHI5 535 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PRORSD1PA6NEY8 169 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GRID2O43424 1007 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CNOT3O75175 753 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ANXA4P09525 319 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 HMGA1P17096 107 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 ARFIP1P53367 373 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 MAPK12P53778 367 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 VAC14Q08AM6 782 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 TOP3AQ13472 1001 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SUZ12Q15022 739 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DHCR24Q15392 516 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms