RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 H2AFJQ9BTM1 129 aa18.82■□□□□ 0.6
LMNB1-202ENST00000395354 OPTCQ9UBM4 332 aa18.82■□□□□ 0.6
LMNB1-202ENST00000395354 ZNF225Q9UK10 706 aa18.82■□□□□ 0.6
LMNB1-202ENST00000395354 PDE10AQ9Y233 779 aa18.82■□□□□ 0.6
LMNB1-202ENST00000395354 PABPN1LA6NDY0 278 aaKnown RBP18.81■□□□□ 0.6
LMNB1-202ENST00000395354 K7EPI3 171 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 K7ESM1 405 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 PCCBP05166 539 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 CYP2A7P20853 494 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 PGM1P36871 562 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 DHPSP49366 369 aaPredicted RBP18.81■□□□□ 0.6
LMNB1-202ENST00000395354 RAP1GDS1P52306 607 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 CYLC2Q14093 348 aaPredicted RBP18.81■□□□□ 0.6
LMNB1-202ENST00000395354 INPP5AQ14642 412 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 IRF4Q15306 451 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 WDR45BQ5MNZ6 344 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 RAET1GQ6H3X3 334 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 PNCKQ6P2M8 343 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 RGL4Q8IZJ4 473 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 POU5F2Q8N7G0 328 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 DENND6BQ8NEG7 585 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ESAMQ96AP7 390 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 TUBB1Q9H4B7 451 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 NOL11Q9H8H0 719 aaKnown RBP18.81■□□□□ 0.6
LMNB1-202ENST00000395354 TRIM39Q9HCM9 518 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ST14Q9Y5Y6 855 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 HS3ST3A1Q9Y663 406 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 PIKFYVEQ9Y2I7 2098 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 A0A1B0GTL3 188 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 SLC5A10A0PJK1 596 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 OR2AG2A6NM03 316 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 FPGTO14772 594 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 INPP4BO15327 924 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 VEGFDO43915 354 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 MATN4O95460 622 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ATP6V1G2O95670 118 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 HSPA7P48741 367 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 CTSCP53634 463 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ERVPABLB-1P60509 514 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 MAPRE2Q15555 327 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 SYTL3Q4VX76 610 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ZNF648Q5T619 568 aaPredicted RBP18.81■□□□□ 0.6
LMNB1-202ENST00000395354 TMEM220Q6QAJ8 160 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ADAMTSL4Q6UY14 1074 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 RNF165Q6ZSG1 346 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 VRK3Q8IV63 474 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 DDIASQ8IXT1 998 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 MCOLN3Q8TDD5 553 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 DNASE2BQ8WZ79 361 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 TMEM159Q96B96 161 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 C3orf30Q96M34 536 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 KCNA7Q96RP8 456 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 MIR1-1HGQ9H1L0 117 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 AKTIPQ9H8T0 292 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ARL15Q9NXU5 204 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 CA5BQ9Y2D0 317 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 ANGPTL3Q9Y5C1 460 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 R4GN57 208 aa18.81■□□□□ 0.6
LMNB1-202ENST00000395354 LOC100653049A0A140TA62 436 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 POM121BA6NF01 834 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 OR7A17O14581 309 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 STK16O75716 305 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 KRT34O76011 436 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 OR4F21O95013 312 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 LBPP18428 481 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 PRDX3P30048 256 aaKnown RBP18.8■□□□□ 0.6
LMNB1-202ENST00000395354 IGFALSP35858 605 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 CLDN2P57739 230 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 GTF2H3Q13889 308 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 C18orf21Q32NC0 220 aaPredicted RBP18.8■□□□□ 0.6
LMNB1-202ENST00000395354 XKR7Q5GH72 579 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 LYSMD4Q5XG99 296 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 OGFOD2Q6N063 350 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 ZC3H14Q6PJT7 736 aaKnown RBP18.8■□□□□ 0.6
LMNB1-202ENST00000395354 PRR23BQ6ZRT6 265 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 LRRC70Q7Z2Q7 622 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 SPATA19Q7Z5L4 167 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 ADGRG6Q86SQ4 1221 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 TMEM145Q8NBT3 493 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 BMFQ96LC9 184 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 LINC00615Q96LM1 132 aaPredicted RBP18.8■□□□□ 0.6
LMNB1-202ENST00000395354 NTMT1Q9BV86 223 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 IPPKQ9H8X2 491 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 G3BP2Q9UN86 482 aaKnown RBP18.8■□□□□ 0.6
LMNB1-202ENST00000395354 GPR34Q9UPC5 381 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 SLCO1B1Q9Y6L6 691 aa18.8■□□□□ 0.6
LMNB1-202ENST00000395354 C17orf113A0A1B0GUU1 675 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 LIN7AO14910 233 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 CCNT2O60583 730 aaKnown RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 KATNA1O75449 491 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 PSIP1O75475 530 aaKnown RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 PRR35P0CG20 571 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 ITPKAP23677 461 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 TEAD1P28347 426 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 TRIM23P36406 574 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 MRPL19P49406 292 aaKnown RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 ACADVLP49748 655 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 PLOD1Q02809 727 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms