RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SMURF1Q9HCE7 757 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 IMPAD1Q9NX62 359 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 TRAPPC4Q9Y296 219 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 MRPL11Q9Y3B7 192 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 MAB21L2Q9Y586 359 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 TANC1Q9C0D5 1861 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 PMS2P1A4D2B8 440 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM74A7A6NL05 159 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CBX4O00257 560 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 UPK1AO00322 258 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 MITFO75030 526 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 METTL18O95568 372 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CD63P08962 238 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC2A4P14672 509 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 MGAT1P26572 445 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CDH6P55285 790 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CYP4F8P98187 520 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SPIRE1Q08AE8 756 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SNAPC1Q16533 368 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC35F1Q5T1Q4 408 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SLC6A19Q695T7 634 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SLFN12LQ6IEE8 588 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FSTL4Q6MZW2 842 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 RTL4Q6ZR62 310 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SPATA6LQ8N4H0 392 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 PAPD5Q8NDF8 572 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 SETD9Q8NE22 299 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 CLEC4DQ8WXI8 215 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 BSNDQ8WZ55 320 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 ACCSQ96QU6 501 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 FIZ1Q96SL8 496 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 RBM4BQ9BQ04 359 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 RBM4Q9BWF3 364 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 UGT2B28Q9BY64 529 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 IL22Q9GZX6 179 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 NMUR1Q9HB89 426 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 RC3H2Q9HBD1 1191 aaKnown RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 TMEM8AQ9HCN3 771 aa8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-201ENST00000379599 LACTBL1A8MY62 500 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 C6orf229H3BNL8 230 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 SIGLEC6O43699 453 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 POP7O75817 140 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 CABYRO75952 493 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 CFDP00746 253 aaPredicted RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 HEXBP07686 556 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 HPGDP15428 266 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 RAB3BP20337 219 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 SSTR4P31391 388 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 PPP3CCP48454 512 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 BCAT1P54687 386 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 C1QTNF8P60827 252 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 CSNK2BP67870 215 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 PSPHP78330 225 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 ASAH1Q13510 395 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 SEMA5AQ13591 1074 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 TEAD4Q15561 434 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 RFX4Q33E94 735 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 C8orf82Q6P1X6 216 aaPredicted RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 SCARA5Q6ZMJ2 495 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 USP45Q70EL2 814 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 RPS27LQ71UM5 84 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 FBXO30Q8TB52 745 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 BPIFB1Q8TDL5 484 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 ZNF384Q8TF68 577 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 ADAMTS14Q8WXS8 1223 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 RDH12Q96NR8 316 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 PGLYRP2Q96PD5 576 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 PAPOLGQ9BWT3 736 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 MRPL4Q9BYD3 311 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 NIFKQ9BYG3 293 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 SDCBP2Q9H190 292 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 AMBNQ9NP70 447 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 MIOXQ9UGB7 285 aa8.34□□□□□ -1.08
NHLRC3-201ENST00000379599 hCG_1984214I3L0E3 225 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 UBXN8O00124 270 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 PCDH17O14917 1159 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 TRIM3O75382 744 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 HPRP00739 348 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 TSPAN19P0C672 248 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 ETV6P41212 452 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 TSPAN7P41732 249 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 GSTM5P46439 218 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 YWHAEP62258 255 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 CDH18Q13634 790 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 DMC1Q14565 340 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 NFIXQ14938 502 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 EMC2Q15006 297 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 NOMO1Q15155 1222 aa8.33□□□□□ -1.08
NHLRC3-201ENST00000379599 SBK1Q52WX2 424 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms