RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NXNL1Q96CM4 212 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ZNF416Q9BWM5 594 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 CACNA2D2Q9NY47 1150 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ZDHHC2Q9UIJ5 367 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 STOML2Q9UJZ1 356 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 NOD1Q9Y239 953 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ACOT9Q9Y305 439 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 AKR7A2O43488 359 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 RASAL1O95294 804 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 POP4O95707 220 aaKnown RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 MT-CYBP00156 380 aaPredicted RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 OR4Q2P0C623 313 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 SRCP12931 536 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ALDH4A1P30038 563 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 FCGRTP55899 365 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 IRF9Q00978 393 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ALDH6A1Q02252 535 aaKnown RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 EIF4EBP2Q13542 120 aaPredicted RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 ZNF273Q14593 569 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 PARP15Q460N3 678 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ARMC4Q5T2S8 1044 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 CEP68Q76N32 757 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ACVR1CQ8NER5 493 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 YIPF5Q969M3 257 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 ISL2Q96A47 359 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 FCRL2Q96LA5 508 aaPredicted RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 MNTQ99583 582 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 REXO4Q9GZR2 422 aaKnown RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 TMEM245Q9H330 911 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 AGPAT4Q9NRZ5 378 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
FXN-201ENST00000377270 FBXO5Q9UKT4 447 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 NEU3Q9UQ49 428 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 CSNK1G3Q9Y6M4 447 aa15.2■□□□□ 0.02
FXN-201ENST00000377270 FAM149AA5PLN7 773 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 MPOP05164 745 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 JUNP05412 331 aaKnown RBP15.19■□□□□ 0.02
FXN-201ENST00000377270 SLC10A3P09131 477 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SLC2A3P11169 496 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 CD53P19397 219 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 DNAJB1P25685 340 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PSMA3P25788 255 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 HLA-FP30511 346 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 CCR1P32246 355 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 YWHAHQ04917 246 aaPredicted RBP15.19■□□□□ 0.02
FXN-201ENST00000377270 GPR68Q15743 365 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 FUT11Q495W5 492 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PDSS1Q5T2R2 415 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 ZBTB37Q5TC79 503 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 KIF18BQ86Y91 864 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SCN4BQ8IWT1 228 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 ARHGAP12Q8IWW6 846 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SVOPQ8N4V2 548 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PTP4A1Q93096 173 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 BEX2Q9BXY8 128 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 DGCR6LQ9BY27 220 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 NMRAL1Q9HBL8 299 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 ACSS2Q9NR19 701 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 AURKCQ9UQB9 309 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 AAR2Q9Y312 384 aaKnown RBP15.19■□□□□ 0.02
FXN-201ENST00000377270 PSMD3O43242 534 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 MOCS2O96007 188 aaPredicted RBP15.19■□□□□ 0.02
FXN-201ENST00000377270 APOA1P02647 267 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 C2P06681 752 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SAT1P21673 171 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 GRIA4P48058 902 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 CYBRD1Q53TN4 286 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 REP15Q6BDI9 236 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 BEND4Q6ZU67 534 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 C16orf62Q7Z3J2 963 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SPRED1Q7Z699 444 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SCD5Q86SK9 330 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 IPMKQ8NFU5 416 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PHF10Q8WUB8 498 aaKnown RBP15.19■□□□□ 0.02
FXN-201ENST00000377270 UFD1Q92890 307 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PHOX2BQ99453 314 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SLC39A8Q9C0K1 460 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 PCDHB16Q9NRJ7 776 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 TMEM181Q9P2C4 612 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 SLC39A10Q9ULF5 831 aa15.19■□□□□ 0.02
FXN-201ENST00000377270 TDRD15B5MCY1 1934 aaKnown RBP15.18■□□□□ 0.02
FXN-201ENST00000377270 TNNI3P19429 210 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 RAB3AP20336 220 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 MSH3P20585 1137 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 FASP25445 335 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
FXN-201ENST00000377270 LSM3P62310 102 aaKnown RBP15.18■□□□□ 0.02
FXN-201ENST00000377270 ZNF33AQ06730 810 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 CCINQ13939 588 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 ACOX1Q15067 660 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 PLCL1Q15111 1095 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 RAP1GAP2Q684P5 730 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 SFRP1Q8N474 314 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 NAT16Q8N8M0 369 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
FXN-201ENST00000377270 NECTIN4Q96NY8 510 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms