RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 IPCEF1Q8WWN9 437 aaPredicted RBP20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 DNASE1L2Q92874 299 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 ZSCAN5AQ9BUG6 496 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 THUMPD3Q9BV44 507 aaKnown RBP20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 UCKL1Q9NWZ5 548 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 RBPJLQ9UBG7 517 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 TRAPPC4Q9Y296 219 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 AAR2Q9Y312 384 aaKnown RBP20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 SNX10Q9Y5X0 201 aa20.16■□□□□ 0.82
TMEFF1-201ENST00000374879 PSMD3O43242 534 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 ARHGEF9O43307 516 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 ARHGEF15O94989 841 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 ADRA1BP35368 520 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 TAB1Q15750 504 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 FAM126BQ8IXS8 530 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 FNDC5Q8NAU1 212 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 UBASH3BQ8TF42 649 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 KIF12Q96FN5 646 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 NPY6RQ99463 290 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 IKZF5Q9H5V7 419 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 RWDD3Q9Y3V2 267 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 CENPFP49454 3210 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 CXCR6O00574 342 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 PPEF2O14830 753 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 OR7A10O76100 309 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 CREMQ03060 361 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 FNDC1Q4ZHG4 1894 aaPredicted RBP20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 CARD16Q5EG05 197 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 CPZQ66K79 652 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 SYVN1Q86TM6 617 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 GALNT6Q8NCL4 622 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 LRRC20Q8TCA0 184 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 DPF3Q92784 378 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 ZNF419Q96HQ0 510 aaPredicted RBP20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 COPS4Q9BT78 406 aa20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 NDRG4Q9ULP0 352 aaKnown RBP20.15■□□□□ 0.82
TMEFF1-201ENST00000374879 SCN1AP35498 2009 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PCDHGA12O60330 932 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PMPCBO75439 489 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PAPSS2O95340 614 aaPredicted RBP20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 POU3F3P20264 500 aaPredicted RBP20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 AZGP1P25311 298 aaKnown RBP20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PRIM2P49643 509 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 ERVK-8P63133 956 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PWP1Q13610 501 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 SHQ1Q6PI26 577 aaKnown RBP20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 YIPF7Q8N8F6 280 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 APH1BQ8WW43 257 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 FCGR1BQ92637 280 aa20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 RGS17Q9UGC6 210 aaPredicted RBP20.14■□□□□ 0.82
TMEFF1-201ENST00000374879 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 A0A0B4J293 547 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 SEC22BO75396 215 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 CRISP3P54108 245 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 LCP2Q13094 533 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 C5orf22Q49AR2 442 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 RNF31Q96EP0 1072 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 TIGARQ9NQ88 270 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 CRYL1Q9Y2S2 319 aa20.14■□□□□ 0.81
TMEFF1-201ENST00000374879 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 CCL22O00626 93 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ENPP3O14638 875 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 PDPK1O15530 556 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 LGALS2P05162 132 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 MSH3P20585 1137 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 SOX6P35712 828 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 HCAR3P49019 387 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 BNC1Q01954 994 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ADIGQ0VDE8 80 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 TP53BP2Q13625 1128 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 BTBD16Q32M84 506 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 XKR7Q5GH72 579 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 C6orf136Q5SQH8 315 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 PAMR1Q6UXH9 720 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 TSPYL5Q86VY4 417 aaPredicted RBP20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 NLRP8Q86W28 1048 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 PLCZ1Q86YW0 608 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 OR4M2Q8NGB6 313 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 NT5C3BQ969T7 300 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 NCLNQ969V3 563 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 AMBNQ9NP70 447 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 VPS4AQ9UN37 437 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ERVW-1Q9UQF0 538 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ELOVL7A1L3X0 281 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 A8MX80 341 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 DFFAO00273 331 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 CACNG3O60359 315 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 HOXA9P31269 272 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 TIE1P35590 1138 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 SEMA3BQ13214 749 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 SNTA1Q13424 505 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ZNF767PQ75MW2 155 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ZNF557Q8N988 423 aaPredicted RBP20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 ST13P5Q8NFI4 369 aaPredicted RBP20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 OR8J3Q8NGG0 315 aa20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 MCCC1Q96RQ3 725 aaPredicted RBP20.13■□□□□ 0.81
TMEFF1-201ENST00000374879 MRPL9Q9BYD2 267 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms