RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 SLC10A7Q0GE19 358 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CBX3Q13185 183 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 HGSNATQ68CP4 663 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SLC22A17Q8WUG5 538 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 BADQ92934 168 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SLC38A4Q969I6 547 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SEC61A2Q9H9S3 476 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CICQ96RK0 1608 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PEX12O00623 359 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 AREL1O15033 823 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CDC123O75794 336 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 GNAZP19086 355 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 DRD4P21917 467 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CXCR1P25024 350 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TGFBR2P37173 567 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 APLP1P51693 650 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CAPZA1P52907 286 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ID2Q02363 134 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ADGRF1Q5T601 910 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 NXPE1Q8N323 547 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 FAM47BQ8NA70 645 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PLIN3O60664 434 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CCNB2O95067 398 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MPIP34949 423 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 LIMK2P53671 638 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ABATP80404 500 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TARDBPQ13148 414 aaKnown RBP eCLIP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 OLIG2Q13516 323 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 FBXL22Q6P050 247 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TTC27Q6P3X3 843 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 STX12Q86Y82 276 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 EIF1ADQ8N9N8 165 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 C11orf24Q96F05 449 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 COPS4Q9BT78 406 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 GPR88Q9GZN0 384 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 LTN1O94822 1766 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 GRXCR1A8MXD5 290 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 KLK3P07288 261 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CCNFP41002 786 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 RPL6Q02878 288 aaKnown RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF648Q5T619 568 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 LRRTM4Q86VH4 590 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 GKN2Q86XP6 184 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 APLFQ8IW19 511 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 SFRP1Q8N474 314 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 C11orf65Q8NCR3 313 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 NAT14Q8WUY8 206 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 COMMD4Q9H0A8 199 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TRIM39Q9HCM9 518 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 RNF186Q9NXI6 227 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 WRBO00258 174 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PAPSS2O95340 614 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CSN2P05814 226 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TCF4P15884 667 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 HTR7P34969 479 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CCR3P51677 355 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 JAM2P57087 298 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 LRP8Q14114 963 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF776Q68DI1 518 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 DENND5AQ6IQ26 1287 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 SPATC1Q76KD6 591 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PIM3Q86V86 326 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF516Q92618 1163 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 GDAP2Q9NXN4 497 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 UBR1Q8IWV7 1749 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 LEFTY2O00292 366 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TBX1O43435 398 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CFHP08603 1231 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CARTPTQ16568 116 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 LPAL2Q16609 132 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 MEIOBQ8N635 442 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 OR2T34Q8NGX1 318 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 SUSD3Q96L08 255 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CCM2Q9BSQ5 444 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 OSBPL11Q9BXB4 747 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 NMUR2Q9GZQ4 415 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 METTL7AQ9H8H3 244 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 MRC1P22897 1456 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PEAK1Q9H792 1746 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 FAM237AA0A1B0GTK4 181 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PER3P56645 1201 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 ODF4Q2M2E3 257 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 PRAMEF13Q5VWM6 474 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 C7orf57Q8NEG2 295 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TRMOQ9BU70 441 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 XPNPEP1Q9NQW7 623 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 CENPMQ9NSP4 180 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 MED1Q15648 1581 aaPredicted RBP8.38□□□□□ -1.07
ABCA4-201ENST00000370225 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
ABCA4-201ENST00000370225 TULP2O00295 520 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms