RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PEX12O00623 359 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PIRTP0C851 137 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 MPSTP25325 297 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CSTF2P33240 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
CUX1-203ENST00000360264 RAB15P59190 212 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 NOMO3P69849 1222 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 TARDBPQ13148 414 aaKnown RBP eCLIP9.51□□□□□ -0.899e-7■■■■□ 26.1
CUX1-203ENST00000360264 ZNF234Q14588 700 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 RALGPS1Q5JS13 557 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ZNF776Q68DI1 518 aaPredicted RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR6K6Q8NGW6 343 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 STRADBQ9C0K7 418 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR51V1Q9H2C8 321 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 TFB2MQ9H5Q4 396 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 KLF15Q9UIH9 416 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 WASF3Q9UPY6 502 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 KCNU1A8MYU2 1149 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 MATN2O00339 956 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 HOXB9P17482 250 aaPredicted RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 AQP1P29972 269 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SLC6A4P31645 630 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 TRABD2AQ86V40 505 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 COPS5Q92905 334 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 GTF2IRD1Q9UHL9 959 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FADS3Q9Y5Q0 445 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR7A10O76100 309 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SEC13P55735 322 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FBXO43Q4G163 708 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TSSK3Q96PN8 268 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 HES2Q9Y543 173 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ATRNO75882 1429 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TRAPPC6AO75865 159 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 MPP1Q00013 466 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 WDR45BQ5MNZ6 344 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 P2RY11Q96G91 374 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 CCM2Q9BSQ5 444 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ZSCAN5AQ9BUG6 496 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 RAB9BQ9NP90 201 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SLC38A8A6NNN8 435 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PLGLB1Q02325 96 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 RASGEF1CQ8N431 466 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 KLRG1Q96E93 195 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ASPNQ9BXN1 380 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 EGFL7Q9UHF1 273 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 VEGFDO43915 354 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 RPLP0P05388 317 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 SP140Q13342 867 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SLC30A6Q6NXT4 461 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 TPK1Q9H3S4 243 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 C14orf166Q9Y224 244 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 PRKAB1Q9Y478 270 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SPEF2Q9C093 1822 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ITGA10O75578 1167 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 EPHA3P29320 983 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ARL2P36404 184 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FAM174BQ3ZCQ3 159 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 IQCCQ4KMZ1 466 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PLEKHG4Q58EX7 1191 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FRMD7Q6ZUT3 714 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ACAT2Q9BWD1 397 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 RAB36O95755 333 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ANXA4P09525 319 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 CDH12P55289 794 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ADAM15Q13444 863 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 HSDL1Q3SXM5 330 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ALG1LQ6GMV1 187 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SCIMPQ6UWF3 145 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PLD5Q8N7P1 536 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TMIEQ8NEW7 156 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 B4GALT7Q9UBV7 327 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FBXW11Q9UKB1 542 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PDE10AQ9Y233 779 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 CKAP5Q14008 2032 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 CPNE3O75131 537 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 SDHAF4Q5VUM1 108 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 RBM44Q6ZP01 1051 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 NINJ1Q92982 152 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SLC35G5Q96KT7 338 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 NMUR1Q9HB89 426 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TRIM36Q9NQ86 728 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 DKKL1Q9UK85 242 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 C8AP07357 584 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ZNF12P17014 697 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TNFSF9P41273 254 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 C3orf33Q6P1S2 294 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 GKN2Q86XP6 184 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 HID1Q8IV36 788 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 NODALQ96S42 347 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms