RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CXCL12P48061 93 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CLCNKAP51800 687 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CCNG1P51959 295 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 THOP1P52888 689 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 BNIP1Q12981 228 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CWF19L1Q69YN2 538 aaKnown RBP16.59■□□□□ 0.25
TPM1-205ENST00000357980 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 ACAD11Q709F0 780 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 OR5AR1Q8NGP9 310 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 OR9A1PQ8NGU1 263 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 OR56A3Q8NH54 315 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 ACTRT2Q8TDY3 377 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 OSGEPL1Q9H4B0 414 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 SAR1AQ9NR31 198 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 SLC12A4Q9UP95 1085 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 TIMM22Q9Y584 194 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 SLCO1B1Q9Y6L6 691 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 E9PBE3 544 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 IFRD1O00458 451 aaPredicted RBP16.59■□□□□ 0.25
TPM1-205ENST00000357980 KLHL41O60662 606 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 KATNA1O75449 491 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CDC16Q13042 620 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 GRB7Q14451 532 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 ALG11Q2TAA5 492 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 DCUN1D3Q8IWE4 304 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CDYL2Q8N8U2 506 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 OR5K2Q8NHB8 316 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 MAGEC3Q8TD91 643 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 ZNF480Q8WV37 535 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 TSACCQ96A04 125 aaPredicted RBP16.59■□□□□ 0.25
TPM1-205ENST00000357980 C3orf30Q96M34 536 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 DNAJC11Q9NVH1 559 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 INTS7Q9NVH2 962 aaKnown RBP16.59■□□□□ 0.25
TPM1-205ENST00000357980 KLQ9UEF7 1012 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 SLC22A14Q9Y267 594 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 PTGDR2Q9Y5Y4 395 aa16.59■□□□□ 0.25
TPM1-205ENST00000357980 CAPN14A8MX76 684 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 PIP5K1BO14986 540 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 NDUFS2O75306 463 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 CRCPO75575 148 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 ENO1P06733 434 aaKnown RBP16.58■□□□□ 0.24
TPM1-205ENST00000357980 ITPKAP23677 461 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 SRP54P61011 504 aaKnown RBP16.58■□□□□ 0.24
TPM1-205ENST00000357980 CHCHD4Q8N4Q1 142 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 PHC3Q8NDX5 983 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 CADM4Q8NFZ8 388 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 SNX19Q92543 992 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 ATP6V1E2Q96A05 226 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 CCDC106Q9BWC9 280 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 INVSQ9Y283 1065 aa16.58■□□□□ 0.24
TPM1-205ENST00000357980 CFAP20Q9Y6A4 193 aaKnown RBP16.58■□□□□ 0.24
TPM1-205ENST00000357980 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 METTL12A8MUP2 240 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 SCAMP1O15126 338 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 PDGFBP01127 241 aaPredicted RBP16.57■□□□□ 0.24
TPM1-205ENST00000357980 CAPN1P07384 714 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 EBLN1P0CF75 366 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 SIGLEC14Q08ET2 396 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 NAE1Q13564 534 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 LRP8Q14114 963 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 EFL1Q7Z2Z2 1120 aaKnown RBP16.57■□□□□ 0.24
TPM1-205ENST00000357980 MILR1Q7Z6M3 343 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 SNX31Q8N9S9 440 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 CEP70Q8NHQ1 597 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 NECAB3Q96P71 396 aaPredicted RBP16.57■□□□□ 0.24
TPM1-205ENST00000357980 OR4K3Q96R72 315 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 ZNF385DQ9H6B1 395 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 TRPS1Q9UHF7 1281 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 BTRCQ9Y297 605 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 DGKBQ9Y6T7 804 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 CACNA1IQ9P0X4 2223 aa16.57■□□□□ 0.24
TPM1-205ENST00000357980 AXIN1O15169 862 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 PI15O43692 258 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 PRAMEF4O60810 478 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 RPN2P04844 631 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 T-ENOLP0DO92 83 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 ERGP11308 486 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 IDSP22304 550 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 CD27P26842 260 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 ARL1P40616 181 aaPredicted RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 MAGEA9P43362 315 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 UBAP2LQ14157 1087 aaKnown RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 CLCA4Q14CN2 919 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 KRT72Q14CN4 511 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 XKR7Q5GH72 579 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 TCHHL1Q5QJ38 904 aaPredicted RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 PRAMEF9Q5VWM5 478 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 LARP4Q71RC2 724 aaKnown RBP eCLIP16.56■□□□□ 0.249e-10■□□□□ 8.2
TPM1-205ENST00000357980 THOC6Q86W42 341 aaKnown RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 TREML1Q86YW5 311 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 LRRC56Q8IYG6 542 aaPredicted RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 PPFIBP2Q8ND30 876 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 METTL6Q8TCB7 284 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 RAD51AP1Q96B01 352 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 SLC6A18Q96N87 628 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 INSM2Q96T92 566 aaPredicted RBP16.56■□□□□ 0.24
TPM1-205ENST00000357980 MENTQ9BUN1 341 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 TRIM33Q9UPN9 1127 aa16.56■□□□□ 0.24
TPM1-205ENST00000357980 RNF11Q9Y3C5 154 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms