RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 B4GAT1O43505 415 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 MAPK1P28482 360 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 UFM1P61960 85 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 CDKL1Q00532 357 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SCN1BQ07699 218 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 LEMD2Q8NC56 503 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ELOVL7A1L3X0 281 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 CHURC1-FNTBB4DL54 471 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 PRKAR1AP10644 381 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 GSK3BP49841 420 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ALKAL1Q6UXT8 129 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 TTC29Q8NA56 475 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 C2CD4AQ8NCU7 369 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 GTPBP3Q969Y2 492 aaKnown RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ASB2Q96Q27 587 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 C2orf49Q9BVC5 232 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 PAQR5Q9NXK6 330 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 RAB23Q9ULC3 237 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 H3BNH8 94 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 NPHS1O60500 1241 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 SLC11A1P49279 550 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 CNTN1Q12860 1018 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 TPRG1LQ5T0D9 272 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 FAAH2Q6GMR7 532 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF613Q6PF04 617 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 ARHGAP12Q8IWW6 846 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 STON2Q8WXE9 905 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 KAT2AQ92830 837 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■□□□□ 10.2
SREBF1-202ENST00000355815 INHBEP58166 350 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 STX4Q12846 297 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 PMS2P3Q13401 168 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 RANBP10Q6VN20 620 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 LYSMD3Q7Z3D4 306 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 TRMOQ9BU70 441 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 CHIAQ9BZP6 476 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 NUP214P35658 2090 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-202ENST00000355815 F5P12259 2224 aa13.79□□□□□ -0.2
SREBF1-202ENST00000355815 OR6C75A6NL08 312 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 OR2AG2A6NM03 316 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CLDN11O75508 207 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 HNF4AP41235 474 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 SLC15A1P46059 708 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 FOXA1P55317 472 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 HERVK_113P63132 956 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 FEM1CQ96JP0 617 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 ERVK-6Q9BXR3 956 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 SMG9Q9H0W8 520 aaKnown RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PLAC1Q9HBJ0 212 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 AASDHPPTQ9NRN7 309 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CPQQ9Y646 472 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 A6NL46 340 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MYCLP1P12525 358 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TNNI3P19429 210 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TYMPP19971 482 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PCSK6P29122 969 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 NOS3P29474 1203 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 GSTM5P46439 218 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MYBPC1Q00872 1141 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 IRF8Q02556 426 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TRPV3Q8NET8 790 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TMEM39AQ9NV64 488 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CFAP97Q9P2B7 532 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 NFKBIL1Q9UBC1 381 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 K7ERQ8 282 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MLYCDO95822 493 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MAGEA6P43360 314 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 RAB15P59190 212 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 PUDPQ08623 228 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 FBXL19Q6PCT2 694 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 DEPDC4Q8N2C3 294 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 GRPEL2Q8TAA5 225 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 TTYH1Q9H313 450 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-202ENST00000355815 CDK14O94921 469 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 S1PR4O95977 384 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 IFNA14P01570 189 aa13.78□□□□□ -0.2
SREBF1-202ENST00000355815 ST8SIA6P61647 398 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms