RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TPD52L3Q96J77 140 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ACAT2Q9BWD1 397 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SLC39A8Q9C0K1 460 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ABCG8Q9H221 673 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 IKZF5Q9H5V7 419 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 NARFLQ9H6Q4 476 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 LTBP3Q9NS15 1303 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TSPAN4O14817 238 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 PER2O15055 1255 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 POLR1CO15160 346 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 STX7O15400 261 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CD3EAPO15446 510 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CAPN5O15484 640 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 AKR7A2O43488 359 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 HBP1O60381 514 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ERN1O75460 977 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 FHP07954 510 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 PRSS56P0CW18 603 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MTHFD2P13995 350 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MYL9P24844 172 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TNFSF8P32971 234 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GRK5P34947 590 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TIE1P35590 1138 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 UGT2B10P36537 528 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SCNN1AP37088 669 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 UGT2B15P54855 530 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 POU6F2P78424 691 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MXD1Q05195 221 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SMARCB1Q12824 385 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MRPL28Q13084 256 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CDONQ4KMG0 1287 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZMAT1Q5H9K5 638 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 PDZK1Q5T2W1 519 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 KIAA1614Q5VZ46 1190 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 FAM131AQ6UXB0 335 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CYP4Z2PQ8N1L4 340 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 LSMEM1Q8N8F7 131 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 FLCNQ8NFG4 579 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 OR52B6Q8NGF0 335 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 PYURFQ96I23 114 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 OR52E6Q96RD3 313 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 REEP1Q9H902 201 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MRM3Q9HC36 420 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SYTL2Q9HCH5 934 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TMLHEQ9NVH6 421 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MPP6Q9NZW5 540 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SNX7Q9UNH6 387 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 I3L521 148 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MLYCDO95822 493 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 NPPAP01160 153 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ITGAMP11215 1152 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ITGA2P17301 1181 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 JUNDP17535 347 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 PTPRAP18433 802 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 CCNCP24863 283 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GBX1Q14549 363 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 QPRTQ15274 297 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 DUSP7Q16829 419 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 YIF1BQ5BJH7 314 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SPANXN4Q5MJ08 99 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 C9orf57Q5W0N0 161 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 DPP9Q86TI2 863 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 FAM217AQ8IXS0 508 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 KIAA1958Q8N8K9 716 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF548Q8NEK5 533 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SLC7A6Q92536 515 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 FCGR1BQ92637 280 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF566Q969W8 418 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GFM1Q96RP9 751 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GPR20Q99678 358 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TTPALQ9BTX7 342 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SNTG1Q9NSN8 517 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GPR83Q9NYM4 423 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF112Q9UJU3 913 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF490Q9ULM2 529 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF451Q9Y4E5 1061 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 NRCAMQ92823 1304 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 A0A0X1KG70 313 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 A0A1W2PQ09 198 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ZBTB42B2RXF5 422 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 SMLR1H3BR10 107 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 M0R082 166 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 PCDHGA12O60330 932 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 NDUFS3O75489 264 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 OR2B3O76000 313 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ARIH2O95376 493 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 PKLRP30613 574 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 SCN1BQ07699 218 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 GRIK2Q13002 908 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 GPR50Q13585 617 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 TSTQ16762 297 aaKnown RBP7.46□□□□□ -1.21
BRCA1-201ENST00000352993 KYAT1Q16773 422 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 RFTN2Q52LD8 501 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms