RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 KCNJ9Q92806 393 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 WBP1Q96G27 269 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 PITPNM3Q9BZ71 974 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 SPRY4Q9C004 299 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 FBXO6Q9NRD1 293 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 LATS2Q9NRM7 1088 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 IARS2Q9NSE4 1012 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 KLHL42Q9P2K6 505 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 ZC3H7BQ9UGR2 993 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 RALYQ9UKM9 306 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 PLAGL1Q9UM63 463 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 SDK2Q58EX2 2172 aa15.26■□□□□ 0.03
TSPAN4-201ENST00000346501 PABPN1LA6NDY0 278 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 ZNF839A8K0R7 811 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 SEC31AO94979 1220 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 FKBP9O95302 570 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 ITGB2P05107 769 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 HBQ1P09105 142 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 ENO3P13929 434 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 LIFP15018 202 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 ST6GAL1P15907 406 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 UGT2B7P16662 529 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 STAT5AP42229 794 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 SLC1A2P43004 574 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 NAA25Q14CX7 972 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 GPR19Q15760 415 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 SLC5A12Q1EHB4 618 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 LRRC8EQ6NSJ5 796 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 PWWP2BQ6NUJ5 590 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 FBXO38Q6PIJ6 1188 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 KIAA0408Q6ZU52 694 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 DENND6AQ8IWF6 608 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 PALM2Q8IXS6 379 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 C19orf47Q8N9M1 422 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 SPATA4Q8NEY3 305 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 FAM136AQ96C01 138 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 CLIP3Q96DZ5 547 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 CFAP36Q96G28 342 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 SLC45A3Q96JT2 553 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 CATSPER2Q96P56 530 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 TRAPPC9Q96Q05 1148 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 IRAK4Q9NWZ3 460 aa15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 UTP11Q9Y3A2 253 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-201ENST00000346501 DSPP15924 2871 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TMEM150CB9EJG8 249 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 RASGRF2O14827 1237 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 C1orf105O95561 183 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 MSL3P1P0C860 447 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 CBSLP0DN79 551 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TCN2P20062 427 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 IVDP26440 423 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 CBSP35520 551 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 DLSTP36957 453 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 HSD17B2P37059 387 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 ELK3P41970 407 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 SKIV2L2P42285 1042 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 RGS4P49798 205 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 ITGA1P56199 1179 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 SF1Q15637 639 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 KLHL38Q2WGJ6 581 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 KIAA1614Q5VZ46 1190 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 NEK10Q6ZWH5 1172 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TIPARPQ7Z3E1 657 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 OR2L8Q8NGY9 312 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 SEC14L1Q92503 715 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 SLC39A7Q92504 469 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 INPP5DQ92835 1189 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 ZNF501Q96CX3 271 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 CERS2Q96G23 380 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 OR2A14Q96R47 310 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 KLHL25Q9H0H3 589 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TAS2R13Q9NYV9 303 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 SPATA7Q9P0W8 599 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TRMT6Q9UJA5 497 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 TSR3Q9UJK0 312 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 CHMP2BQ9UQN3 213 aa15.24■□□□□ 0.03
TSPAN4-201ENST00000346501 WDFY3Q8IZQ1 3526 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 LOC101059948A0A1B0GTJ6 334 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 C21orf140B9A014 251 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 E7EQ34 232 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 KATNA1O75449 491 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 NTRK1P04629 796 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 ERVK-10P10266 1014 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 SFTPCP11686 197 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 PVRP15151 417 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 ZNF28P17035 718 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 CARSP49589 748 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 RPS15P62841 145 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 PDIA2Q13087 525 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 SRSF6Q13247 344 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 UNC5BQ8IZJ1 945 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 C2CD4AQ8NCU7 369 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 LHX9Q9NQ69 397 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms