RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 UBQLN2Q9UHD9 624 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NCKAP1Q9Y2A7 1128 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MRPS7Q9Y2R9 242 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TESMINQ9Y4I5 508 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SH3D21A4FU49 640 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FAM47E-STBD1D6RA91 191 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CLIC1O00299 241 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 IFNA16P05015 189 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FPR1P21462 350 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC9A3P48764 834 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 BMXP51813 675 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GALNT2Q10471 571 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC10A2Q12908 348 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PPP1R3AQ16821 1122 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GPAT3Q53EU6 434 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GPR153Q6NV75 609 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MMAAQ8IVH4 418 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PJA1Q8NG27 643 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NDRG1Q92597 394 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 OSBPL2Q9H1P3 480 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GORASP2Q9H8Y8 452 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RABL2AQ9UBK7 228 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RABL2BQ9UNT1 228 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RIPK3Q9Y572 518 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TCAF2A6NFQ2 919 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SERPINA3P01011 423 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FGBP02675 491 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLURP2P0DP57 97 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 EPHX2P34913 555 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CDH4P55283 916 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NFKB2Q00653 900 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DGKZQ13574 1117 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FBXO48Q5FWF7 155 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FAM171A1Q5VUB5 890 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CHADLQ6NUI6 762 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DEF8Q6ZN54 512 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ANKRD46Q86W74 232 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SPARTQ8N0X7 666 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CDK15Q96Q40 435 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 HERPUD2Q9BSE4 406 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PDCD10Q9BUL8 212 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PIGUQ9H490 435 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TM9SF3Q9HD45 589 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NPAP1Q9NZP6 1156 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 STON1Q9Y6Q2 735 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC9A3R1O14745 358 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ECDO95905 644 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MMP3P08254 477 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ANXA4P09525 319 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC5A2P31639 672 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RYKP34925 604 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ABATP80404 500 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CSTF1Q05048 431 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 HEPACAMQ14CZ8 416 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SMU1Q2TAY7 513 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TMIGD2Q96BF3 282 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 C1orf74Q96LT6 269 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GSDMCQ9BYG8 508 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ENPP5Q9UJA9 477 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MAB21L2Q9Y586 359 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 G6PDP11413 515 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 COL6A1P12109 1028 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ABHD18Q0P651 414 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ATG9BQ674R7 924 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CLEC20AQ6ZU45 233 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CHST15Q7LFX5 561 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MOSPD2Q8NHP6 518 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CLHC1Q8NHS4 586 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GEMIN6Q8WXD5 167 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GTPBP3Q969Y2 492 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF599Q96NL3 588 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 KLHL5Q96PQ7 755 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RANBP9Q96S59 729 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 EIF3KQ9UBQ5 218 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGA11Q9Y5H2 935 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 A0A1W2PQ67 120 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 A0A1W2PQH9 124 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 OR2B3O76000 313 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 LRG1P02750 347 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CKMP06732 381 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC35E2BP0CK96 405 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SPIN4Q56A73 249 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FAM151BQ6UXP7 276 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NATD1Q8N6N6 113 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 OR4F6Q8NGB9 312 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PSMG2Q969U7 264 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TSGA13Q96PP4 275 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC32A1Q9H598 525 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FZD4Q9ULV1 537 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RUVBL1Q9Y265 456 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CPQQ9Y646 472 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MID1O15344 667 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NTSP30990 170 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ACSL1P33121 698 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 WSCD2Q2TBF2 565 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PLA2G4EQ3MJ16 856 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SYPL2Q5VXT5 272 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CCBE1Q6UXH8 406 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SIDT2Q8NBJ9 832 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF486Q96H40 463 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms