RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CST1P01037 141 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HIST1H2AGP0C0S8 130 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HIST1H2ADP20671 130 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 IST1P53990 364 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 LAPTM5Q13571 262 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 DPY19L3Q6ZPD9 716 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 LRRC70Q7Z2Q7 622 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ARHGAP22Q7Z5H3 698 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ANKRD46Q86W74 232 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 TMC8Q8IU68 726 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 VOPP1Q96AW1 172 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ZNF689Q96CS4 500 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ECHDC3Q96DC8 303 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HIST1H2AHQ96KK5 128 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HIST1H2AJQ99878 128 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 H2AFJQ9BTM1 129 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ETAA1Q9NY74 926 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 CDC14AQ9UNH5 594 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 KIAA1671Q9BY89 1806 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 KRT87PA6NCN2 255 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 G3V2T6 193 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 GNGT2O14610 69 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 GSNP06396 782 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 EEF1B2P24534 225 aaKnown RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 ARHGEF6Q15052 776 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 CCNYL2Q5T2Q4 361 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 MCCC1Q96RQ3 725 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 B4GALT6Q9UBX8 382 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 SLC25A13Q9UJS0 675 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 UTS2RQ9UKP6 389 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 SNX6Q9UNH7 406 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HS3ST2Q9Y278 367 aa17.28■□□□□ 0.36
LRCH3-201ENST00000334859 HEMK1Q9Y5R4 338 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-201ENST00000334859 MYOFQ9NZM1 2061 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 AREL1O15033 823 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 MTX2O75431 263 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 PRKD3O94806 890 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 C1SP09871 688 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 AOAHP28039 575 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 ELK4P28324 431 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 S100A3P33764 101 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 PMS2P3Q13401 168 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 NEDD8Q15843 81 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 PGS1Q32NB8 556 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 RUNDC3AQ59EK9 446 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 SLC39A5Q6ZMH5 540 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 Q6ZVU0 165 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 VRK3Q8IV63 474 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 MICU2Q8IYU8 434 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 ADAMTS16Q8TE57 1224 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 CORO1BQ9BR76 489 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 DCUN1D5Q9BTE7 237 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 BRD9Q9H8M2 597 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 CXorf21Q9HAI6 301 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.27■□□□□ 0.36
LRCH3-201ENST00000334859 IFT80Q9P2H3 777 aaPredicted RBP17.27■□□□□ 0.36
LRCH3-201ENST00000334859 DNAJB9Q9UBS3 223 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 FAM8A1Q9UBU6 413 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 PCDHB14Q9Y5E9 798 aa17.27■□□□□ 0.36
LRCH3-201ENST00000334859 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.35
LRCH3-201ENST00000334859 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 SCELO95171 688 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 C8GP07360 202 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 ITPKAP23677 461 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 PTCHD3Q3KNS1 767 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 KCTD8Q6ZWB6 473 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 FAM120BQ96EK7 910 aaKnown RBP17.27■□□□□ 0.35
LRCH3-201ENST00000334859 SLC12A9Q9BXP2 914 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 KAT8Q9H7Z6 458 aaKnown RBP17.27■□□□□ 0.35
LRCH3-201ENST00000334859 PAK6Q9NQU5 681 aaPredicted RBP17.27■□□□□ 0.35
LRCH3-201ENST00000334859 KLHL42Q9P2K6 505 aa17.27■□□□□ 0.35
LRCH3-201ENST00000334859 H0Y858 1186 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 LRATO95237 230 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 B3GALT4O96024 378 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 TACR1P25103 407 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 SPINT3P49223 89 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 RAB39AQ14964 217 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 ZXDCQ2QGD7 858 aaPredicted RBP17.26■□□□□ 0.35
LRCH3-201ENST00000334859 CDKL4Q5MAI5 379 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 GPR180Q86V85 440 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 HS3ST5Q8IZT8 346 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 TCAIMQ8N3R3 496 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 CHST14Q8NCH0 376 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 C12orf43Q96C57 262 aaKnown RBP17.26■□□□□ 0.35
LRCH3-201ENST00000334859 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 PAIP1Q9H074 479 aaKnown RBP17.26■□□□□ 0.35
LRCH3-201ENST00000334859 RNF208Q9H0X6 261 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 TOR3AQ9H497 397 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 SMURF2Q9HAU4 748 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 HPS4Q9NQG7 708 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 SLCO3A1Q9UIG8 710 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 CCL26Q9Y258 94 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 IGLV3-16A0A075B6K0 115 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 TRBV5-3A0A0A0MS03 114 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 NEDD8-MDP1E9PL57 170 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 B4GAT1O43505 415 aa17.26■□□□□ 0.35
LRCH3-201ENST00000334859 ERN1O75460 977 aaKnown RBP17.26■□□□□ 0.35
LRCH3-201ENST00000334859 C8AP07357 584 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms