RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 HOMER3Q9NSC5 361 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 ANAPC5Q9UJX4 755 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 SNX7Q9UNH6 387 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 SRPK3Q9UPE1 567 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 MRFAP1Q9Y605 127 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
GTF3C6-201ENST00000329970 K7EM74 188 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 KPNA5O15131 536 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 ZNF749O43361 778 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 APOA4P06727 396 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 CCDC175P0C221 793 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TPSB2P20231 275 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 AGXTP21549 392 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 RPS3P23396 243 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 AOAHP28039 575 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 PEBP1P30086 187 aaKnown RBP13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 PKLRP30613 574 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 NPY2RP49146 381 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 BRD3Q15059 726 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TPSAB1Q15661 275 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 ZIC1Q15915 447 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 MED25Q71SY5 747 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 PRUNE1Q86TP1 453 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 DCUN1D3Q8IWE4 304 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TMEM102Q8N9M5 508 aaPredicted RBP13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TEX19Q8NA77 164 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 MIB2Q96AX9 1013 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 IP6K3Q96PC2 410 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 SLC7A5P2Q9GIP4 190 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 FAM60AQ9NP50 221 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 ACSS2Q9NR19 701 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 CHRAC1Q9NRG0 131 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 SPHK1Q9NYA1 384 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 BFARQ9NZS9 450 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 PADI2Q9Y2J8 665 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 TDRKHQ9Y2W6 561 aaKnown RBP13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 PCSK5Q92824 1860 aa13.1□□□□□ -0.31
GTF3C6-201ENST00000329970 CLEC18AA5D8T8 446 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 C9J4A7 227 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 CD3EAPO15446 510 aaKnown RBP13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 DNAJB5O75953 348 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 TMEM63AO94886 807 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 S1PR4O95977 384 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 PDGFAP04085 211 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 ZSCAN5DPP0CG00 497 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 NR1D1P20393 614 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 PTGIRP43119 386 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 GCGRP47871 477 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 HSPA14Q0VDF9 509 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 GRB7Q14451 532 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 TMED2Q15363 201 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 CLEC18BQ6UXF7 455 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 CLEC18CQ8NCF0 446 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 LKAAEAR1Q8TD35 194 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 DOCK10Q96BY6 2186 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 GBP5Q96PP8 586 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 SLC25A23Q9BV35 468 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 RAB11FIP5Q9BXF6 653 aa13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
GTF3C6-201ENST00000329970 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ARGFXA6NJG6 315 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ZSCAN9O15535 394 aaPredicted RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 KLF7O75840 302 aaPredicted RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 OR2B3O76000 313 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ONECUT2O95948 504 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 FGGP02679 453 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 CD9P21926 228 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 MAGEA6P43360 314 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 PGDP52209 483 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 RRADP55042 308 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 SSPNQ14714 243 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 PTCHD3Q3KNS1 767 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 CPZQ66K79 652 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 LRRC8BQ6P9F7 803 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 TRIM73Q86UV7 250 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 RAB43Q86YS6 212 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 LRRC8AQ8IWT6 810 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ZBTB2Q8N680 514 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 LINC01555Q8NAE3 123 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 DENND1AQ8TEH3 1009 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 KLHL25Q9H0H3 589 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 MARCH4Q9P2E8 410 aaPredicted RBP13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms