RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NME7Q9Y5B8 376 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 LTBP4Q8N2S1 1624 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 A8MVJ9 347 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CXCL11O14625 94 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IFNA14P01570 189 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IGLV3-25P01717 112 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 C9P02748 559 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IFNA8P32881 189 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MAP2K4P45985 399 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ITGA1P56199 1179 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ANGPT1Q15389 498 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 OR4D1Q15615 310 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NKG7Q16617 165 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 VMACQ2NL98 169 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 HABP4Q5JVS0 413 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CDKL4Q5MAI5 379 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PLET1Q6UQ28 207 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 DET1Q7L5Y6 550 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 HDDC2Q7Z4H3 204 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SERPINA11Q86U17 422 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NOXA1Q86UR1 476 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZMIZ2Q8NF64 920 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SGCDQ92629 289 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SPATA9Q9BWV2 254 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CRTAC1Q9NQ79 661 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ASAH2Q9NR71 780 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MARCH4Q9P2E8 410 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IKZF3Q9UKT9 509 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SPO11Q9Y5K1 396 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TEX51A0A1B0GUA7 166 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SH3D21A4FU49 640 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SLC35F4A4IF30 521 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF682O95780 498 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 VTNP04004 478 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RPL9P32969 192 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 KDELR2P33947 212 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MAPKAPK2P49137 400 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RGS6P49758 472 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RPP38P78345 283 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF33BQ06732 778 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 DGKZQ13574 1117 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 KIAA0040Q15053 153 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 VARS2Q5ST30 1063 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FAHD1Q6P587 224 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 EIF3MQ7L2H7 374 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CALHM3Q86XJ0 350 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TEX26Q8N6G2 289 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GDPD1Q8N9F7 314 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 OR10T2Q8NGX3 314 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 DHRS9Q9BPW9 319 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ZYG11BQ9C0D3 744 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CLPBQ9H078 707 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 IMPAD1Q9NX62 359 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MPP6Q9NZW5 540 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TRPS1Q9UHF7 1281 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHGA3Q9Y5H0 932 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SMIM35A0A1B0GVV1 85 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CCDC182A6NF36 153 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 KPNA6O60684 536 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RAMP2O60895 175 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CRYZL1O95825 349 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SERPINA1P01009 418 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LCKP06239 509 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PRKACGP22612 351 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 FMO3P31513 532 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LIPAP38571 399 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RPL38P63173 70 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ATAD3CQ5T2N8 411 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TIGD3Q6B0B8 471 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 KIAA1143Q96AT1 154 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 GPR21Q99679 349 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MAPKAP1Q9BPZ7 522 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ACBD6Q9BR61 282 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 MKRN2Q9H000 416 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LRTM1Q9HBL6 345 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PAQR5Q9NXK6 330 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PIN4Q9Y237 131 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 POLR3HQ9Y535 204 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHB1Q9Y5F3 818 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CSADQ9Y600 493 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 E5RI56 91 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 SOCS7O14512 581 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 HOXC11O43248 304 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 TMCC2O75069 709 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ARSAP15289 507 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PSMA1P25786 263 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 RCVRNP35243 200 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 LRRC74AQ0VAA2 488 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ASAH1Q13510 395 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 QPRTQ15274 297 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 C1orf52Q8N6N3 182 aaKnown RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 JPH3Q8WXH2 748 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-201ENST00000316707 Q96MT0 163 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 CDCA4Q9BXL8 241 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
PTPN13-201ENST00000316707 PIF1Q9H611 641 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms