RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 PRAMEF10O60809 474 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SYN1P17600 705 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 PRKAG1P54619 331 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 RIPPLY1Q0D2K3 151 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 BNIP3Q12983 259 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TMEM214Q6NUQ4 689 aaKnown RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TUBA3EQ6PEY2 450 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 NCCRP1Q6ZVX7 275 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 PLD4Q96BZ4 506 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HAVCR1Q96D42 359 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 COPS4Q9BT78 406 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 KCNN2Q9H2S1 579 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 BRD9Q9H8M2 597 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 AGO1Q9UL18 857 aaKnown RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 J3KR12 359 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CCNB2O95067 398 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 F7P08709 466 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CDH4P55283 916 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SKP1P63208 163 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 NRG1Q02297 640 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SLC18A2Q05940 514 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SUZ12Q15022 739 aaKnown RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ZNHIT3Q15649 155 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 PM20D1Q6GTS8 502 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 STYXQ8WUJ0 223 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HEXDCQ8WVB3 486 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 IGSF21Q96ID5 467 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 LRRC3Q9BY71 257 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TPK1Q9H3S4 243 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CFAP97Q9P2B7 532 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TRPS1Q9UHF7 1281 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SPEF1Q9Y4P9 236 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 YIPF1Q9Y548 306 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SCN1AP35498 2009 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 FABP12A6NFH5 140 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TOR1BO14657 336 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 GLUD1P00367 558 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 C1RP00736 705 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HIST1H2ABP04908 130 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ATF4P18848 351 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TNNI3P19429 210 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MLLT6P55198 1093 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 GNA12Q03113 381 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ZDHHC20Q5W0Z9 365 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HIST3H2AQ7L7L0 130 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 RTN4RL1Q86UN2 441 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HIST1H2ACQ93077 130 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 DMRTB1Q96MA1 342 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MTRRQ9UBK8 725 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CFL2Q9Y281 166 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 DNAJB1P25685 340 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 LINGO4Q6UY18 593 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ZDHHC21Q8IVQ6 265 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 GPR65Q8IYL9 337 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CLP1Q92989 425 aaKnown RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ZNF347Q96SE7 839 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MKLN1Q9UL63 735 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 POLR1DQ9Y2S0 133 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 H0Y858 1186 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 REM1O75628 298 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CLPXO76031 633 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 PRLP01236 227 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 HLA-DQA2P01906 255 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MT-ND1P03886 318 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CD36P16671 472 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ITIH1P19827 911 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 BUD31P41223 144 aaPredicted RBP10.56□□□□□ -0.72
HNF4A-201ENST00000316099 CYP4F8P98187 520 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SCAPQ12770 1279 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 SFT2D3Q587I9 215 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 TPGS2Q68CL5 300 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 PEX5LQ8IYB4 626 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 GJD3Q8N144 294 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.727e-7■■■□□ 18.1
HNF4A-201ENST00000316099 TCF25Q9BQ70 676 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 ANKRA2Q9H9E1 313 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 KCNE2Q9Y6J6 123 aa10.56□□□□□ -0.72
HNF4A-201ENST00000316099 FAM86C2PA6NEL3 165 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 CNTN5O94779 1100 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 PGLSO95336 258 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 CLDN9O95484 217 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 IFNW1P05000 195 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 PRPS2P11908 318 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 XRCC1P18887 633 aaPredicted RBP10.55□□□□□ -0.72
HNF4A-201ENST00000316099 CCR10P46092 362 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 BIKQ13323 160 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 SNAPC1Q16533 368 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 UBE2R2Q712K3 238 aaPredicted RBP10.55□□□□□ -0.72
HNF4A-201ENST00000316099 DNAJB7Q7Z6W7 309 aaPredicted RBP10.55□□□□□ -0.72
HNF4A-201ENST00000316099 OAFQ86UD1 273 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 NPWQ8N729 165 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
HNF4A-201ENST00000316099 FEM1CQ96JP0 617 aa10.55□□□□□ -0.72
HNF4A-201ENST00000316099 NSMCE3Q96MG7 304 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms