RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RYKP34925 604 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 KRT20P35900 424 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 LIPAP38571 399 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 SLC35A2P78381 396 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 TWF1Q12792 350 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 SLC14A2Q15849 920 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 VTCN1Q7Z7D3 282 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RASAL3Q86YV0 1011 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF548Q8NEK5 533 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 PYCR2Q96C36 320 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 TEKT2Q9UIF3 430 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF225Q9UK10 706 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CARD8Q9Y2G2 431 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RFXANKO14593 260 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CACNG3O60359 315 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 NBNO60934 754 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 SH3BGRLO75368 114 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 USP2O75604 605 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 HLA-DPA1P20036 260 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 MC4RP32245 332 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 GNPDA1P46926 289 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 TUBA1BP68363 451 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RPP38P78345 283 aaKnown RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 FAM189BP81408 668 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 IFITM2Q01629 132 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 MVKQ03426 396 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RUNX1T1Q06455 604 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 ELP6Q0PNE2 266 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 IL18R1Q13478 541 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CCDC85BQ15834 202 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 INO80DQ53TQ3 878 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 Q6ZPB1 254 aaPredicted RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 TUBA1AQ71U36 451 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CEP68Q76N32 757 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF605Q86T29 641 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 THEM5Q8N1Q8 247 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 CFAP52Q8N1V2 620 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 PAAF1Q9BRP4 392 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 OR51E2Q9H255 320 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 MROH8Q9H579 483 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 MOSPD1Q9UJG1 213 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 PCDHGB6Q9Y5F9 930 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PTTG1O95997 202 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ABCB1P08183 1280 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ODC1P11926 461 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ACVRL1P37023 503 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PPP3CCP48454 512 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 UBE3AQ05086 875 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TBRG1Q3YBR2 411 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MARCH8Q5T0T0 291 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SYT6Q5T7P8 510 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 RAB43Q86YS6 212 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ELMOD1Q8N336 334 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 DPP10Q8N608 796 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 BTN2A3PQ96KV6 586 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SERPINB11Q96P15 392 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 EMILIN2Q9BXX0 1053 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 GORASP2Q9H8Y8 452 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 LRTM1Q9HBL6 345 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SLC52A3Q9NQ40 469 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 FARSBQ9NSD9 589 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 OPTCQ9UBM4 332 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 FKBPLQ9UIM3 349 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 PEX16Q9Y5Y5 336 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TSC22D2O75157 780 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TBX18O95935 607 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MLLT6P55198 1093 aaPredicted RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CDC42EP1Q00587 391 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CD83Q01151 205 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 CREMQ03060 361 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 DDX39BQ13838 428 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TIGD5Q53EQ6 642 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 C10orf120Q5SQS8 335 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 AGAP6Q5VW22 663 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 KIAA1614Q5VZ46 1190 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 OVOS1Q6IE37 1185 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 LAIR2Q6ISS4 152 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 GOLGA7Q7Z5G4 137 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 GTF2H4Q92759 462 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MYDGFQ969H8 173 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 AGAP4Q96P64 663 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 YME1L1Q96TA2 773 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 DCAF13Q9NV06 445 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 DUSP12Q9UNI6 340 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 ABCG2Q9UNQ0 655 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
TRUB1-201ENST00000298746 MIA3Q5JRA6 1907 aa11.16□□□□□ -0.62
TRUB1-201ENST00000298746 TREHO43280 583 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms