RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 MSANTD2Q6P1R3 559 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 BLOC1S3Q6QNY0 202 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 GCNT7Q6ZNI0 430 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 RNF180Q86T96 592 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 SLC22A9Q8IVM8 553 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 PEX5LQ8IYB4 626 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 HHIPL1Q96JK4 782 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 BTN2A3PQ96KV6 586 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 C8orf48Q96LL4 319 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 ABCG8Q9H221 673 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 TUBB1Q9H4B7 451 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
CLPB-201ENST00000294053 PLXNA3P51805 1871 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 CASP8AP2Q9UKL3 1982 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
CLPB-201ENST00000294053 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 ARVCFO00192 962 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 S1PR4O95977 384 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 CAPN1P07384 714 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TIAL1Q01085 375 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLPB-201ENST00000294053 SERINC3Q13530 473 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 LRRC8DQ7L1W4 858 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 METTL4Q8N3J2 472 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 BHMTQ93088 406 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 CHCHD6Q9BRQ6 235 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 SPON2Q9BUD6 331 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 GKN1Q9NS71 199 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 C3orf18Q9UK00 162 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 VPS4AQ9UN37 437 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 REV3LO60673 3130 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 IGLV3-10A0A075B6K4 115 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 WASH4PA8MWX3 477 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TTC34A8MYJ7 566 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 AIREO43918 545 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 CPNE3O75131 537 aaKnown RBP11.8□□□□□ -0.52
CLPB-201ENST00000294053 CRYZL1O95825 349 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 EOMESO95936 686 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 RAP2AP10114 183 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 PRKCAP17252 672 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TPRG1LQ5T0D9 272 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 LEMD2Q8NC56 503 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 WBP2Q969T9 261 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 EXOSC4Q9NPD3 245 aaKnown RBP11.8□□□□□ -0.52
CLPB-201ENST00000294053 EHD3Q9NZN3 535 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 ABCD2Q9UBJ2 740 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TEKT2Q9UIF3 430 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 LEF1Q9UJU2 399 aaPredicted RBP11.8□□□□□ -0.52
CLPB-201ENST00000294053 INTS6Q9UL03 887 aaKnown RBP11.8□□□□□ -0.52
CLPB-201ENST00000294053 BTBD3Q9Y2F9 522 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 ANGPTL3Q9Y5C1 460 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 SCN5AQ14524 2016 aa11.8□□□□□ -0.52
CLPB-201ENST00000294053 TCRBV5S2A0A599 114 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 MROH6A6NGR9 719 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 PFKLP17858 780 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 CD83Q01151 205 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 CDK5R2Q13319 367 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 ZNF404Q494X3 552 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 ATAD3CQ5T2N8 411 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 TRIM48Q8IWZ4 208 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 PHACTR4Q8IZ21 702 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 EID3Q8N140 333 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 SVOPQ8N4V2 548 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 SLC47A1Q96FL8 570 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 SCLYQ96I15 445 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 FUBP3Q96I24 572 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLPB-201ENST00000294053 CARS2Q9HA77 564 aaKnown RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 ARNT2Q9HBZ2 717 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 WBP11Q9Y2W2 641 aaKnown RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 SPEF1Q9Y4P9 236 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 DNMT3AQ9Y6K1 912 aaPredicted RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 ZW10O43264 779 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 DNAJB2P25686 324 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 EIF2DP41214 584 aaKnown RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 AGTR2P50052 363 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 DEFA1P59665 94 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 DEFA3P59666 94 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 DNAJB13P59910 316 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 NKX3-2P78367 333 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 SDE2Q6IQ49 451 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 HACD2Q6Y1H2 254 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 GDPD3Q7L5L3 318 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 GALNT10Q86SR1 603 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 ISCA2Q86U28 154 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 SLC38A6Q8IZM9 456 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 TXNDC15Q96J42 360 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 UBXN10Q96LJ8 280 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 Q96MT0 163 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 TRIM54Q9BYV2 358 aa11.79□□□□□ -0.52
CLPB-201ENST00000294053 MRM3Q9HC36 420 aaKnown RBP11.79□□□□□ -0.52
CLPB-201ENST00000294053 CPNE5Q9HCH3 593 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms