RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 OR4C6Q8NH72 309 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 OR10G6Q8NH81 332 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF420Q8TAQ5 688 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GIPC3Q8TF64 312 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TRMT61BQ9BVS5 477 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CDH22Q9UJ99 828 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 WASH4PA8MWX3 477 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 H0YGN5 161 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 OR10H3O60404 316 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CHRNA1P02708 482 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RPL4P36578 427 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ARRB1P49407 418 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ORC1Q13415 861 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SF1Q15637 639 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ITPRIPL2Q3MIP1 535 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ATG9BQ674R7 924 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 OR8H2Q8N162 312 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SDR16C5Q8N3Y7 309 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF614Q8N883 585 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 HMCESQ96FZ2 354 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 COQ7Q99807 217 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 IPPKQ9H8X2 491 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RASSF1Q9NS23 344 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 OBP2AQ9NY56 170 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 NLGN3Q9NZ94 848 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 NDOR1Q9UHB4 597 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CNOT11Q9UKZ1 510 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHAC2Q9Y5I4 1007 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 E7ESA3 106 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 BCKDKO14874 412 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 OXSR1O95747 527 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 EIF5AL1Q6IS14 154 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 XKRXQ6PP77 449 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TPGS1Q6ZTW0 290 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ACTR3BQ9P1U1 418 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ENTPD2Q9Y5L3 495 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 KRT33AO76009 404 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RASGRP1O95267 797 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CHRNGP07510 517 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TPH1P17752 444 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 COL5A3P25940 1745 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 POU1F1P28069 291 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FEN1P39748 380 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GRK6P43250 576 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 USP46P62068 366 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SLC25A11Q02978 314 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MYLK3Q32MK0 819 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 HEATR4Q86WZ0 1026 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SLC15A3Q8IY34 581 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RGL4Q8IZJ4 473 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FAM118BQ9BPY3 351 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PTTG2Q9NZH5 202 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GJE1A6NN92 205 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 AOC2O75106 756 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MTRF1O75570 445 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ATP1B2P14415 290 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 IGFBP5P24593 272 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ERP29P30040 261 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SLC1A2P43004 574 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RPS15AP62244 130 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ECM1Q16610 540 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SOWAHAQ2M3V2 549 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF805Q5CZA5 627 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 C9orf64Q5T6V5 341 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RHBDF2Q6PJF5 856 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 C16orf59Q7L2K0 433 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TSTD1Q8NFU3 115 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ADAM32Q8TC27 787 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 KCTD4Q8WVF5 259 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM234Q8WY98 164 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 VMP1Q96GC9 406 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHB18PQ96TA0 734 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 IL23AQ9NPF7 189 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CPNE7Q9UBL6 633 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SNX10Q9Y5X0 201 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GSC2O15499 205 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ALPPP05187 535 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 THRBP10828 461 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 F8A1P23610 371 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 NRLP54845 237 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RGS8P57771 180 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MZT1Q08AG7 82 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GPM6BQ13491 265 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 CCINQ13939 588 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GRM2Q14416 872 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ELOCQ15369 112 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GRIK5Q16478 980 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GJC2Q5T442 439 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RSBN1Q5VWQ0 802 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FAM151BQ6UXP7 276 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM17Q86X19 198 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RALGPS2Q86X27 583 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GPR150Q8NGU9 434 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SLC38A3Q99624 504 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TIGARQ9NQ88 270 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 DDX18Q9NVP1 670 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MBLAC1A4D2B0 266 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms