RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SELENOMQ8WWX9 145 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 LRCH3Q96II8 777 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 MUC13Q9H3R2 512 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 TRIM39Q9HCM9 518 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 BATF3Q9NR55 127 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 TRANK1O15050 2925 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 LRRK1Q38SD2 2015 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 PRSS51A0A1B0GVH4 220 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ARNTLO00327 626 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 LINC01565O15544 149 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 SEC22BO75396 215 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 PLOD1Q02809 727 aaPredicted RBP22.67■■□□□ 1.22
MSX2-201ENST00000239243 SGO1Q5FBB7 561 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 C6orf10Q5SRN2 563 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 CES5AQ6NT32 575 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 PLCD3Q8N3E9 789 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 CATSPER1Q8NEC5 780 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 PYCR2Q96C36 320 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 DUS3LQ96G46 650 aaKnown RBP22.67■■□□□ 1.22
MSX2-201ENST00000239243 PLA2G2FQ9BZM2 168 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ACTL8Q9H568 366 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ZNHIT2Q9UHR6 403 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 PCDHA9Q9Y5H5 950 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 H3BM21 787 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 RSL1D1O76021 490 aaKnown RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 VARSP26640 1264 aaKnown RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 P2RY2P41231 377 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 PREPP48147 710 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 PFN3P60673 137 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 HMGCS1Q01581 520 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 ADGRE1Q14246 886 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 CAPRIN1Q14444 709 aaKnown RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 PAGE3Q5JUK9 113 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 HABP4Q5JVS0 413 aaKnown RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 LIPJQ5W064 366 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 KLHDC8AQ8IYD2 350 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 ZUFSPQ96AP4 578 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 MYADMQ96S97 322 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 KCNE1BA0A087WTH5 132 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 SERTM1A2A2V5 107 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 PLK4O00444 970 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 VEGFDO43915 354 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 PEX2P28328 305 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 ITPRIPL2Q3MIP1 535 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 OGFRL1Q5TC84 451 aaPredicted RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 TRAPPC5Q8IUR0 188 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 FBXO15Q8NCQ5 510 aaPredicted RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 N4BP2L2Q92802 583 aaPredicted RBP22.66■■□□□ 1.22
MSX2-201ENST00000239243 SLC45A3Q96JT2 553 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 KXD1Q9BQD3 176 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 ATG10Q9H0Y0 220 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 OR2AG1Q9H205 316 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 CMTM6Q9NX76 183 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 FADS3Q9Y5Q0 445 aa22.66■■□□□ 1.22
MSX2-201ENST00000239243 TCRBV3S1A0A5B6 114 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 PDYNP01213 254 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 PRPH2P23942 346 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 GDI1P31150 447 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 IRAK1BP1Q5VVH5 260 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 EGFLAMQ63HQ2 1017 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 LPCAT4Q643R3 524 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 PDSS2Q86YH6 399 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 LINC00615Q96LM1 132 aaPredicted RBP22.65■■□□□ 1.22
MSX2-201ENST00000239243 EFHD1Q9BUP0 239 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 GPR34Q9UPC5 381 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 DOCK8Q8NF50 2099 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 C17orf113A0A1B0GUU1 675 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 NPIPB8E9PQR5 432 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 K7ESM1 405 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 NPC1O15118 1278 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 JUPP14923 745 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 ITPKAP23677 461 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 PBLDP30039 288 aaPredicted RBP22.65■■□□□ 1.22
MSX2-201ENST00000239243 HALP42357 657 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 CASP2P42575 452 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 ZNF658BQ4V348 819 aaPredicted RBP22.65■■□□□ 1.22
MSX2-201ENST00000239243 AGTRAPQ6RW13 159 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 TMEM125Q96AQ2 219 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 ACPTQ9BZG2 426 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 DPY30Q9C005 99 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 STOX2Q9P2F5 926 aaPredicted RBP22.65■■□□□ 1.22
MSX2-201ENST00000239243 RIMS3Q9UJD0 308 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 AP4S1Q9Y587 144 aa22.65■■□□□ 1.22
MSX2-201ENST00000239243 RFXAPO00287 272 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 RNASEH1O60930 286 aaKnown RBP22.64■■□□□ 1.21
MSX2-201ENST00000239243 LAMP2P13473 410 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 MAPK1P28482 360 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 EEFSECP57772 596 aaKnown RBP22.64■■□□□ 1.21
MSX2-201ENST00000239243 CNTN1Q12860 1018 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 CHIT1Q13231 466 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 LRRC36Q1X8D7 754 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 IRGCQ6NXR0 463 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 THOC6Q86W42 341 aaKnown RBP22.64■■□□□ 1.21
MSX2-201ENST00000239243 GOLM1Q8NBJ4 401 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 OR2T34Q8NGX1 318 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 OR2T3Q8NH03 318 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 DNAJB14Q8TBM8 379 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 TMED5Q9Y3A6 229 aa22.64■■□□□ 1.21
MSX2-201ENST00000239243 STON1Q9Y6Q2 735 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms