RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 AGMOQ6ZNB7 445 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 C7orf57Q8NEG2 295 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 ASB2Q96Q27 587 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 TSEN34Q9BSV6 310 aaKnown RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 CINPQ9BW66 212 aaPredicted RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 SLC52A3Q9NQ40 469 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 KRT84Q9NSB2 600 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 DNMT3BQ9UBC3 853 aaKnown RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GLTPD2A6NH11 291 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 PDZK1P1A8MUH7 402 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GADD45AP24522 165 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GKP32189 559 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 PBX3P40426 434 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 ZFP36L2P47974 494 aaKnown RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 CCBE1Q6UXH8 406 aaPredicted RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 LSRQ86X29 649 aaPredicted RBP16.4■□□□□ 0.22
CTDP1-201ENST00000075430 HIPK1Q86Z02 1210 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 SPPL2AQ8TCT8 520 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 SPATA17Q96L03 361 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 BOCQ9BWV1 1114 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GPR63Q9BZJ6 419 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 OGDHLQ9ULD0 1010 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 ULK1O75385 1050 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 MXD1Q05195 221 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 GALNT1Q10472 559 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-201ENST00000075430 PRSS36Q5K4E3 855 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 LEMD2Q8NC56 503 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 MDGA1Q8NFP4 955 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 DPF3Q92784 378 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 APOLD1Q96LR9 279 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 TTYH2Q9BSA4 534 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 CIPCQ9C0C6 399 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 SLC25A37Q9NYZ2 338 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 TESMINQ9Y4I5 508 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 PCDHB9Q9Y5E1 797 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 LCTP09848 1927 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 C2orf81A6NN90 581 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 NT5C1B-RDH14C9J2C7 533 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 IDH3BO43837 385 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 TULP3O75386 442 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-201ENST00000075430 PTRH1Q86Y79 214 aaKnown RBP16.39■□□□□ 0.21
CTDP1-201ENST00000075430 OR6Q1Q8NGQ2 317 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 BRSK1Q8TDC3 778 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 OR51E2Q9H255 320 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 NEK6Q9HC98 313 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 AKIP1Q9NQ31 210 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 UGT2A1Q9Y4X1 527 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 ALDH2P05091 517 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 CDKN2CP42773 168 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 CRISP3P54108 245 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 CREMQ03060 361 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 TUBA3CQ13748 450 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 HIST2H2ACQ16777 129 aaPredicted RBP16.39■□□□□ 0.21
CTDP1-201ENST00000075430 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 OR4F3Q6IEY1 312 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 COLGALT2Q8IYK4 626 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 CITED4Q96RK1 184 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 USE1Q9NZ43 259 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 EHD3Q9NZN3 535 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
CTDP1-201ENST00000075430 TYW5A2RUC4 315 aaKnown RBP16.38■□□□□ 0.21
CTDP1-201ENST00000075430 TGM1P22735 817 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 TACR1P25103 407 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 LIPAP38571 399 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MTA1Q13330 715 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MED22Q15528 200 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 RUNDC3AQ59EK9 446 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MSANTD2Q6P1R3 559 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 BEND5Q7L4P6 421 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 VASH1Q7L8A9 365 aaPredicted RBP16.38■□□□□ 0.21
CTDP1-201ENST00000075430 DEPDC4Q8N2C3 294 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MED16Q9Y2X0 877 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 LOC730098B7Z3J9 87 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 GUCY1B2O75343 617 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MSH3P20585 1137 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 S100A3P33764 101 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 OR1E2P47887 323 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 LRRC73Q5JTD7 316 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 S100ZQ8WXG8 99 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 MAL2Q969L2 176 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 YTHDF1Q9BYJ9 559 aaKnown RBP16.38■□□□□ 0.21
CTDP1-201ENST00000075430 CCSER2Q9H7U1 834 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 GPRC5BQ9NZH0 403 aa16.38■□□□□ 0.21
CTDP1-201ENST00000075430 E2F3O00716 465 aa16.37■□□□□ 0.21
CTDP1-201ENST00000075430 VPS4BO75351 444 aa16.37■□□□□ 0.21
CTDP1-201ENST00000075430 ZNF865P0CJ78 1059 aaPredicted RBP16.37■□□□□ 0.21
CTDP1-201ENST00000075430 PPP2R2BQ00005 443 aa16.37■□□□□ 0.21
CTDP1-201ENST00000075430 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
CTDP1-201ENST00000075430 SLC44A2Q8IWA5 706 aaPredicted RBP16.37■□□□□ 0.21
CTDP1-201ENST00000075430 NLGN4XQ8N0W4 816 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms