RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr462Q5SW50 311 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gata6Q61169 589 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gpr17Q6NS65 339 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr1128Q7TR47 311 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Serpina11Q8CIE0 424 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc7a8Q9QXW9 531 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fer1l6E0CZ42 1862 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r88L7N1W8 857 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 KapP61110 121 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fmo5P97872 533 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Grm5Q3UVX5 1203 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Q8CDN1 933 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fndc5Q8K4Z2 209 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Uxs1Q91XL3 420 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ankrd61Q9CQM6 421 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Armc8Q9DBR3 673 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 PaicsQ9DCL9 425 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 RhouQ9EQT3 261 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Phf11cB4XVP9 339 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Snx21Q3UR97 363 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 GstcdQ5RL51 634 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fam46cQ5SSF7 391 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ei24Q61070 340 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 GkQ64516 559 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gper1Q8BMP4 375 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Atp6v1hQ8BVE3 483 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Msh4Q99MT2 958 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tmem135Q9CYV5 458 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Adamtsl1Q8BLI0 1745 aa15.26■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fignl2J3QK54 644 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Pxmp2P42925 194 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Stxbp5lQ5DQR4 1185 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Olfr735Q7TRM4 354 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cpped1Q8BFS6 312 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sh3rf2Q8BZT2 735 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tcf25Q8R3L2 676 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Klk6Q91Y82 253 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Nt5c1bQ91YE9 573 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Skp1Q9WTX5 163 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cldn24D3YXJ9 220 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc2a7P0C6A1 513 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Rgs16P97428 201 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gm1587Q3UT80 123 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 StradaQ3UUJ4 431 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gpr165Q3V3A3 455 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Zfp78Q5U406 512 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tmem202Q80W35 275 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fam131aQ8BWU3 361 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ppp2r2dQ925E7 453 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fars2Q99M01 451 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gbe1Q9D6Y9 702 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 PrebQ9WUQ2 417 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gpr25P0C5I1 358 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 AladP10518 330 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bop1P97452 732 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fpr-rs6Q3SXG2 339 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Gpr174Q3U507 335 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Srbd1Q497V5 1015 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Grid2Q61625 1007 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 MogsQ80UM7 834 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sephs1Q8BH69 392 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Imp4Q8VHZ7 291 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Sh3d19Q91X43 789 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Pcdhb3Q91XZ7 784 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Nrif1Q923B3 828 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ferd3lQ923Z4 168 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc24a3Q99PD7 645 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Dppa5aQ9CQS7 118 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 2310003L06RikQ9CV82 495 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Usp12Q9D9M2 370 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ap3s1Q9DCR2 193 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ufm1P61961 85 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Hrh2P97292 397 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fam171bQ14CH0 825 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Q8BGK9 164 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Metap1Q8BP48 386 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mcemp1Q9D8U6 183 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tmem174Q9DCX7 243 aa15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Noa1Q9JJG9 693 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Smchd1Q6P5D8 2007 aaKnown RBP15.25■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Atn1O35126 1175 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Znf366Q6NS86 746 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Slc39a4Q78IQ7 660 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Crls1Q80ZM8 303 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Plekhm3Q8BM47 761 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Bcas2Q9D287 225 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Izumo2Q9DA16 220 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CtsrQ9JIA9 334 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Extl1Q9JKV7 669 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Adam24Q9R160 761 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CitP49025 2055 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Fam217bA2AJW5 387 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 CatP24270 527 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Ica1P97411 478 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Lrfn1Q2WF71 766 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Cypt2Q6P924 180 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Tmem164Q6PHN7 296 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Mpp7Q8BVD5 576 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Vmn1r188Q8K3N2 308 aa15.24■□□□□ 0.03
Ccdc88b-201ENSMUST00000113440 Htr3bQ9JHJ5 437 aa15.24■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms