RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Mfsd5Q921Y4 450 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Pih1d1Q9CQJ2 290 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gtpbp8Q9CY28 285 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 PrccQ9EQC8 491 aaKnown RBP18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Mterf1bB9EJ57 379 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Mterf1aQ8CHZ9 379 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc5a2Q923I7 670 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Etv5Q9CXC9 510 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Ssxb6A2BI74 170 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Ppt1O88531 306 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cbx2P30658 519 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Psmb4P99026 264 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Smarcd3Q6P9Z1 483 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 AccslQ3UX83 580 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Kansl1Q80TG1 1036 aaKnown RBP18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cfl1P18760 166 aaKnown RBP18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cyp2c40P56657 491 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Smpdl3bP58242 456 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tbx4P70325 552 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc25a38Q91XD8 326 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc30a7Q9JKN1 378 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 DnpepQ9Z2W0 473 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Hs3st1O35310 311 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Bloc1s1O55102 125 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gli1P47806 1111 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr1299Q7TQX5 312 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Aqp12Q8CHJ2 290 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr1280Q8VGG8 305 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Isoc1Q91V64 297 aa18.12■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc16a2O70324 545 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 St3gal5O88829 414 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Glra2Q7TNC8 452 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cars2Q8BYM8 551 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r125D3Z3M1 369 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cd48P18181 240 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Pgm2Q7TSV4 620 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Snrnp70Q62376 448 aaKnown RBP18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Csnka2ipQ8CH19 720 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Borcs8Q9D6Y4 120 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 PplQ9R269 1755 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zfp949E9Q732 603 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Naa11Q3UX61 218 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Clcn4Q61418 747 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cndp1Q8BUG2 492 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cyp2g1Q9WV19 494 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm5724L7N264 670 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Dnajb5O89114 348 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Csn1s2bP02664 143 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Htr2aP35363 471 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gch1Q05915 241 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zc3hc1Q80YV2 501 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tp53bp1P70399 1969 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm21885A0A286YDN8 145 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Mmp20P57748 482 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rap2aQ80ZJ1 183 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 McmbpQ8R3C0 642 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc44a3Q921V7 656 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cngb3Q9JJZ9 694 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 PtgfrnQ9WV91 879 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Faap100A2ACJ2 879 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r21K7N6Y7 853 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r20L7N2B1 853 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prph2P15499 346 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Acvr2bP27040 536 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Psen1P49769 467 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zfp866Q6PGD2 520 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zswim6Q80TB7 1207 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rpl4Q9D8E6 419 aaKnown RBP18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr706Q9EPF8 316 aa18.11■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tmem265E9Q8G3 109 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gnpda1O88958 289 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 GhrP16882 650 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 DgkbQ6NS52 802 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Wasf2Q8BH43 497 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tlr5Q9JLF7 859 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Itsn1Q9Z0R4 1714 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn1r2A2AMT6 306 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cyp2f2P33267 491 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 CcnjQ3TZI6 379 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cpsf6Q6NVF9 551 aaKnown RBP18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Kctd7Q8BJK1 289 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Angptl7Q8R1Q3 337 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Chst12Q99LL3 419 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm6576F6YTZ4 274 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Hes2O54792 157 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 MndaP0DOV1 425 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Lta4hP24527 611 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 AboP38649 332 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc39a10Q6P5F6 833 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Pdzph1Q8BGR1 1238 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Arhgef19Q8BWA8 802 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr683Q8VGV1 319 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Asf1aQ9CQE6 204 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Men1O88559 611 aaKnown RBP18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 PpibP24369 216 aaKnown RBP18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Mfsd14aP70187 490 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Etaa1Q5SVT3 877 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zfp438Q8BFX2 798 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Setdb2Q8C267 713 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 PdgfcQ8CI19 345 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms