RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 SyncQ9EPM5 470 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Plxnd1Q3UH93 1925 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 A0A286YCH8 300 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 3110040M04RikA0A286YDK0 300 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 A0A286YE43 300 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Dmrta2A2A9A2 531 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r7E9PYL5 915 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r3H3BJ88 915 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r6H3BK29 913 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r8L7N472 848 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PnmtP40935 295 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ephb2P54763 986 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rad51Q08297 339 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ptchd1Q14B62 888 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ifi47Q61635 420 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Nr0b2Q62227 260 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tbccd1Q640P7 552 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Q8BGA7 448 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Wdr47Q8CGF6 920 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Klhl2Q8JZP3 593 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lin7aQ8JZS0 233 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Stx19Q8R1Q0 292 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Retreg1dQ8VE91 480 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Depdc7Q91WS7 511 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ssxb1Q9CPU1 170 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Nipa2Q9JJC8 359 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cyhr1Q9QXA1 311 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Dach1Q9QYB2 751 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slfn3A0A1L1STQ7 640 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr600E9PUN7 314 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fcgr3P08508 261 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 SagP20443 403 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Hsdl2Q2TPA8 490 aaKnown RBP9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gucy2fQ5SDA5 1108 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lrrc8eQ66JT1 795 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fastkd5Q7TMV3 762 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ddhd1Q80YA3 547 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Znf410Q8BKX7 478 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mblac2Q8BL86 279 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sept11Q8C1B7 431 aaKnown RBP9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 McatQ8R3F5 381 aaKnown RBP9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ccdc130Q9D516 385 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 FastkQ9JIX9 511 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ice1E9Q286 2241 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Apol8A2VDH7 339 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1513L7N457 313 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pik3r2O08908 722 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zw10O54692 779 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Inpp1P49442 396 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Traf6P70196 530 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 RalgdsQ03385 852 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 GiprQ0P543 460 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 UcmaQ14BU0 138 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mthfd1lQ3V3R1 977 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rabl6Q5U3K5 725 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PtprnQ60673 979 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Eif2dQ61211 570 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Itih3Q61704 889 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tmem151aQ6GQT5 468 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Dna2Q6ZQJ5 1062 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tas2r38Q7TQA6 331 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lrp10Q7TQH7 713 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Bend5Q8C6D4 421 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfyve21Q8VCM3 234 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 TgdsQ8VDR7 355 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr353Q8VGK0 311 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lgals12Q91VD1 314 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gjd3Q91YD1 278 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Smim11aQ99J19 55 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdk9Q99J95 372 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ilf2Q9CXY6 390 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sphk2Q9JIA7 617 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tdp2Q9JJX7 370 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdh17Q9R100 827 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 NsdhlQ9R1J0 362 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ClcnkbQ9WUB6 687 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 NcdnQ9Z0E0 729 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ccdc175E9PVB3 822 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gata5P97489 404 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PrkcqQ02111 707 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CrtamQ149L7 389 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm5800Q497L3 186 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sema3gQ4LFA9 780 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Taar7bQ5QD11 358 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Jak3Q62137 1100 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pou4f2Q63934 411 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1197Q7TR13 314 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1196Q7TR14 314 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ap4e1Q80V94 1122 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdc16Q8R349 620 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PpidQ9CR16 370 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Wdr5bQ9D7H2 328 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ifrd2Q9D8U0 441 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tm9sf3Q9ET30 587 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cacna2d3Q9Z1L5 1091 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mbd4Q9Z2D7 554 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc8a3S4R2P9 928 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rai1Q61818 1889 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 TomtA1Y9I9 258 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mllt3A2AM29 569 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms