RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 H2-Q8P14430 326 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 H2-Q6P79568 326 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Igfbp5Q07079 271 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 DmwdQ08274 665 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cd300lfQ6SJQ7 337 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr1355Q7TQU9 310 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr538Q7TRT5 310 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zfyve1Q810J8 777 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fam46bQ8C152 427 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Agbl3Q8CDP0 1006 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Hist1h2aaQ8CGP4 129 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fars2Q99M01 451 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Col25a1Q99MQ5 666 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 TympQ99N42 471 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mgat4dQ9D4R2 373 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rnf138rt1Q9D9M9 248 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gtf2h2Q9JIB4 396 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Il20Q9JKV9 176 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 ChmlQ9QZD5 621 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc25a14Q9Z2B2 325 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Spin2gA0A0N4SW15 236 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm10720D3Z1I5 223 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Spin2eJ3QNQ0 234 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 BC024978J3QPC3 361 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mknk1O08605 427 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Wnt6P22727 364 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 DckP43346 260 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ruvbl1P60122 456 aaKnown RBP9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 DtymkP97930 212 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zdhhc11Q14AK4 347 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Lrfn1Q2WF71 766 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Trim63Q38HM4 350 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Snx31Q6P8Y7 439 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ccdc117Q6PB51 277 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Scgb2b2Q6UGQ3 114 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zfp438Q8BFX2 798 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ptk7Q8BKG3 1062 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Bmt2Q8BXK4 403 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slco6c1Q8C0X7 706 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cacnb2Q8CC27 655 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Samd14Q8K070 417 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Lrrc66Q8K0B3 872 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gsg1Q8R1W2 324 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr606Q8VGZ8 319 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Arl2Q9D0J4 184 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Spag4Q9JJF2 443 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gde1Q9JL56 331 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm14781A2A9Q9 366 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ttll8A4Q9F1 832 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm10479K7N6H4 105 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm6502L7N456 481 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Atxn2O70305 1285 aaKnown RBP9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 P06324 132 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ccnb2P30276 398 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ap1s1P61967 158 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 GaltQ03249 379 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tnfaip8l3Q3TBL6 204 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Usp30Q3UN04 517 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pydc3Q3V3Q4 588 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Xkr9Q5GH62 373 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rnf43Q5NCP0 784 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Clec4a4Q5YIR8 236 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Znf280cQ6P3Y5 742 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Znf423Q80TS5 1292 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ap4e1Q80V94 1122 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ca12Q8CI85 354 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mnd1Q8K396 205 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nprl3Q8VIJ8 569 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Trim8Q99PJ2 551 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Q9D979 236 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 CasrQ9QY96 1079 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Skp1Q9WTX5 163 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 FarsbQ9WUA2 589 aaKnown RBP9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 PrebQ9WUQ2 417 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Vmn2r17E9PYF5 849 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm21897J3KMP5 500 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rhox2gL7MUB9 191 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm21750L7N228 499 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Psmc3ipO35047 217 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 NoctO35710 429 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Prkag1O54950 330 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc22a2O70577 553 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mup4P11590 178 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nckap1P28660 1128 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gpat2Q14DK4 801 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 SbplQ3TUY3 232 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 PkdccQ5RJI4 492 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 N4bp1Q6A037 893 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Q6P2K3 674 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Lix1Q6P566 282 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dusp16Q6PCP3 660 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 AY358078Q6UY53 465 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zpbp2Q6X786 326 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Thoc7Q7TMY4 204 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr1037Q7TR84 321 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr814Q7TRH4 310 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ube2q1Q7TSS2 422 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pcdh19Q80TF3 1145 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 4933402J07RikQ8BHX0 270 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 IrgcQ8C262 412 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms