RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Xkr9Q5GH62 373 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 DdnQ80TS7 710 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PimregQ8BFY7 231 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Q8BL95 290 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Q8BWQ6 963 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vopp1Q8R1C3 172 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ccdc71Q8VEG0 433 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pcdhgb2Q91XX7 928 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Chid1Q922Q9 393 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Atp6v1c2Q99L60 427 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Trappc5Q9CQA1 188 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cndp2Q9D1A2 475 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Erp27Q9D8U3 272 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ralgapa2A3KGS3 1872 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Izumo4D3Z690 227 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hmga1P17095 107 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rps6ka3P18654 740 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ruvbl1P60122 456 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Uba1Q02053 1058 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Spire1Q52KF3 598 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hesx1Q61658 185 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Colgalt2Q6NVG7 625 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cfap206Q6PE87 622 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Svs1Q6WIZ7 820 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fbxl21Q8BFZ4 434 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hspa13Q8BM72 471 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fmo9Q8C116 539 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pabpc5Q8C7D3 381 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc35e2Q8C811 405 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ca12Q8CI85 354 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rnf8Q8VC56 488 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1208Q8VG47 308 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Q9D3J9 298 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cldn9Q9Z0S7 217 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lipo4D3Z608 396 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mkln1O89050 735 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fgf18O89101 207 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 S100a9P31725 113 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ap2m1P84091 435 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Plpp4Q0VBU9 271 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mrm3Q5ND52 418 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 HltfQ6PCN7 1003 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cyp2r1Q6VVW9 501 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Reep1Q8BGH4 201 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mief1Q8BGV8 463 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lurap1lQ8K2P1 221 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Txndc11Q8K2W3 948 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Sirt3Q8R104 334 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ddx50Q99MJ9 734 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dsn1Q9CYC5 348 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pinx1Q9CZX5 332 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 EbplQ9D0P0 206 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fndc8Q9D2H8 321 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rhox9Q9EQM5 227 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc25a54B1AUS6 473 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm7535F7CXE4 302 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dnmt3cP0DOY1 709 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Csn1s1P19228 313 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Col6a2Q02788 1034 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zzz3Q6KAQ7 910 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rap2aQ80ZJ1 183 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Itpk1Q8BYN3 419 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nckap1lQ8K1X4 1134 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ing3Q8VEK6 421 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Emid1Q91VF5 444 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nmd3Q99L48 503 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Themis3Q9CU24 569 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 IcmtQ9EQK7 283 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm45233A0A0N4SVE0 221 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1480A0A140LIR8 359 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Atp6ap1lD3Z5W0 336 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r61L7N2B8 865 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nrp2O35375 931 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hmx2P43687 273 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pcyt1aP49586 367 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hepacam2Q4VAH7 463 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 IpmkQ7TT16 396 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Agbl3Q8CDP0 1006 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cfap61Q8CEL2 1252 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ugt2b1Q8R084 529 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Med17Q8VCD5 649 aaKnown RBP8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr690Q8VH18 315 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Clp1Q99LI9 425 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tada1Q99LM9 335 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Retreg3Q9CQV4 466 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Atp5dQ9D3D9 168 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Smg9Q9DB90 520 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Htr3bQ9JHJ5 437 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Wdr12Q9JJA4 423 aa8.31□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm11758A2BEI6 360 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm11757A2BEI8 360 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r96E9PZU5 664 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm8267E9Q207 261 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 AurkcO88445 282 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Stk16O88697 305 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hk1P17710 974 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 ThrbP37242 461 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Serpina7P61939 418 aa8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Arf5P84084 180 aaKnown RBP8.3□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm4951Q3UED7 406 aa8.3□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms