RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Btbd35f27Q5FWA1 498 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Grid2Q61625 1007 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Mbtd1Q6P5G3 631 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 P4ha3Q6W3F0 542 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tecpr1Q80VP0 1166 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Zfp189Q8BKP2 608 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ptpn7Q8BUM3 359 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ssxb2Q8C5Z3 165 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gatad2aQ8CHY6 629 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pcdhga9Q91XX9 932 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 GMCL1P1Q99N64 498 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 5430402E10RikQ9D3N5 173 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tmprss6Q9DBI0 811 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tspan4Q9DCK3 238 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 PnckQ9QYK9 343 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Spta1P08032 2415 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pm20d2A3KG59 431 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Vmn2r120E9PX34 856 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Vmn2r118E9Q1C1 853 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm3476K7N6V0 257 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ring1O35730 406 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 P01650 108 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 P01653 108 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ndufs6P52503 116 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Znf800Q0VEE6 662 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tmem173Q3TBT3 378 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pgap1Q3UUQ7 922 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pan3Q640Q5 837 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 ErfeQ6PGN1 340 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 1700001J03RikQ80ZR8 219 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Slitrk5Q810B7 957 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rab39aQ8BHD0 217 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Spon2Q8BMS2 330 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Inpp5kQ8C5L6 468 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Clcc1Q99LI2 539 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Spcs2Q9CYN2 226 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 FancgQ9EQR6 623 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Limd1Q9QXD8 668 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 PigqQ9QYT7 581 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Psmc3ipO35047 217 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Hsd17b7O88736 334 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 PomcP01193 235 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Anxa6P14824 673 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tbxas1P36423 533 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 TdgP56581 421 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ecm1Q61508 559 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fbxo10Q7TQF2 950 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gpr142Q7TQN9 365 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gabbr2Q80T41 940 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Znf473Q8BI67 892 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Eipr1Q8K0G5 386 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tdrd3Q91W18 743 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Yipf2Q99LP8 312 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Hnrnpa0Q9CX86 305 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Clic3Q9D7P7 237 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tmem41aQ9D8U2 264 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 9530002B09RikQ9EPV7 135 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Phc2Q9QWH1 850 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Lgr5Q9Z1P4 907 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Btbd35f16A0A087WSN2 498 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Slc43a3A2AVZ9 502 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Calhm3J3QMI4 347 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dpysl2O08553 572 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Phb2O35129 299 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 TankP70347 448 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Znf367Q0VDT2 340 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 GmpsQ3THK7 693 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ttc29Q80VM3 471 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Leg1Q8C6C9 337 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Slc46a2Q8CA03 479 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Zfp940Q8R2Q3 566 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dennd2dQ91VV4 469 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Grip1Q925T6 1127 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Lysmd3Q99LE3 305 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dnajb9Q9QYI6 222 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm21103E9Q2Q1 267 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Aldh3b2E9Q3E1 479 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm9732F6QVC4 198 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Lrrc31F6VYM1 502 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm28048F7BCN0 99 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 FaimlJ3QPY3 178 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Atpif1O35143 106 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gosr2O35166 212 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Atoh1P48985 351 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gdi1P50396 447 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Lad1P57016 528 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Lrrn4P59383 733 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nos3P70313 1202 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pecam1Q08481 727 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dnajc11Q5U458 559 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 GapdhsQ64467 440 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Eri1Q7TMF2 345 aaKnown RBP4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr699Q7TRN3 316 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Rhox11Q810N8 206 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pgm2l1Q8CAA7 621 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr1090Q8VGA6 313 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 HlcsQ920N2 722 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Msh4Q99MT2 958 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Acot13Q9CQR4 140 aa4.49□□□□□ -1.69
Prkdc-201ENSMUST00000023352 MtpapQ9D0D3 585 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms