RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Vmn2r31L7N1Z4 861 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Alox8O35936 677 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Npr1P18293 1057 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Hmx3P42581 356 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Lpcat1Q3TFD2 534 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mrgprx2Q3UG50 352 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ccdc190Q3URK1 288 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Xkr4Q5GH67 647 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Slc13a5Q67BT3 572 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm5416Q6IE28 97 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rtl3Q6P1Y1 553 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Olfr1105Q7TR58 312 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Edem2Q8BJT9 577 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mettl2Q8BMK1 389 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Prpsap2Q8R574 369 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ankrd54Q91WK7 299 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Sgo1Q9CXH7 517 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GrifinQ9D1U0 144 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ribc2Q9D4Q1 309 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ccdc81Q9D5W4 654 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Timm50Q9D880 353 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 SrrQ9QZX7 339 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ptchd4B9EKX1 904 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Il20rbE9Q9A6 308 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 XntrpcF8VQM8 1264 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 LatO54957 242 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Itgb1P09055 798 aaKnown RBP11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GhrP16882 650 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gpx3P46412 226 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Oaz1P54369 227 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Entpd1P55772 510 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fmo5P97872 533 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Pdcd1Q02242 288 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Eef2kmtQ3UZW7 335 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Thnsl2Q80W22 483 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Hmgxb4Q80Y32 594 aaKnown RBP11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gabra5Q8BHJ7 463 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Zbtb46Q8BID6 600 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Lig4Q8BTF7 911 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Q8K039 155 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GabrpQ8QZW7 440 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Vps39Q8R5L3 886 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rbms2Q8VC70 383 aaKnown RBP11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Nprl3Q8VIJ8 569 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 As3mtQ91WU5 376 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Grip1Q925T6 1127 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ptp4a3Q9D658 173 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 FcmrA1KXC4 422 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Pramef20B1ARV6 477 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Acp4D3YTS9 425 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 F6Y6L6 278 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 H2-Q1O19441 368 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 H2-Q7P14429 334 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 H2-Q8P14430 326 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 FshrP35378 692 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GlaP51569 419 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 H2-Q6P79568 326 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rps5P97461 204 aaKnown RBP11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Angptl1Q640P2 490 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Galk2Q68FH4 458 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Sgo2Q7TSY8 1164 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GmppbQ8BTZ7 360 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mterf4Q8BVN4 346 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tmsb15lQ8C0W0 80 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Robo4Q8C310 1012 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Colgalt1Q8K297 617 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Vopp1Q8R1C3 172 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Utp4Q8R2N2 686 aaKnown RBP11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Olfr854Q8VFF1 315 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rnf181Q9CY62 165 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mbd3l1Q9D9H3 186 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 DiabloQ9JIQ3 237 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Nectin3Q9JLB9 549 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cldn3Q9Z0G9 219 aa11.29□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm364A2AFI6 671 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Vmn2r54K7N649 806 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rhox2hK7N6P1 191 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 ShdO88834 343 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mtnd1P03888 318 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Il1rl1P14719 567 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Svs4P18419 113 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Asgr1P34927 284 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tlx1P43345 332 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cyp2c38P56655 490 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Atp5jP97450 108 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Padi2Q08642 673 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cntnap5bQ0V8T8 1292 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm5113Q3UGK8 141 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Has1Q61647 583 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Sec24dQ6NXL1 1032 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rad9bQ6WBX7 403 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Aoc2Q812C9 757 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ska3Q8C263 411 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Smoc2Q8CD91 447 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Slc38a4Q8R1S9 547 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tbc1d13Q8R3D1 400 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Pex16Q91XC9 336 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fuca2Q99KR8 461 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Myl9Q9CQ19 172 aa11.28□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Uqcc2Q9CQY6 136 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms