RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 DPP9Q86TI2 863 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 HORMAD1Q86X24 394 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 CHPFQ8IZ52 775 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PGBD3Q8N328 593 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 CARNMT1Q8N4J0 409 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PARP16Q8N5Y8 322 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PAF1Q8N7H5 531 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 Q8N9G6 341 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SPERTQ8NA61 448 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ZNF548Q8NEK5 533 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 IPMKQ8NFU5 416 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 OR56A4Q8NGH8 313 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SPATA22Q8NHS9 363 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SOCS4Q8WXH5 440 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 HTRA1Q92743 480 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ERLEC1Q96DZ1 483 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RPL10LQ96L21 214 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 TEX37Q96LM6 180 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RIPOR3Q96MK2 946 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RAD9AQ99638 391 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PITX2Q99697 317 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 APOL4Q9BPW4 351 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ARPC5LQ9BPX5 153 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 LPIN3Q9BQK8 851 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 TRAF4Q9BUZ4 470 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 COLEC11Q9BWP8 271 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 GON7Q9BXV9 100 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 RNF38Q9H0F5 515 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 WDCPQ9H6R7 721 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 ACTR8Q9H981 624 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 POLE4Q9NR33 117 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 DCAF13Q9NV06 445 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 FBXL12Q9NXK8 326 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 IL37Q9NZH6 218 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 SLAMF8Q9P0V8 285 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 GIMAP2Q9UG22 337 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 OR12D3Q9UGF7 316 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NDRG4Q9ULP0 352 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 USP22Q9UPT9 525 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 NEUROG3Q9Y4Z2 214 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PCDHGB6Q9Y5F9 930 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 PCDHGA3Q9Y5H0 932 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 KLK4Q9Y5K2 254 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 MAU2Q9Y6X3 613 aa4.09□□□□□ -1.75
PTP4A1-205ENST00000626021 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 LCHNA4D1U4 455 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 PDZK1P1A8MUH7 402 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 CXCR6O00574 342 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 PPP6CO00743 305 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 PPEF2O14830 753 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 DSCR3O14972 297 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ANKRD28O15084 1053 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GSTA4O15217 222 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 FGF10O15520 208 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 XPNPEP2O43895 674 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GPR32O75388 356 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 CELF2O95319 508 aaKnown RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 SIX3O95343 332 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GOT2P00505 430 aaKnown RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 FTH1P02794 183 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 MT-ND1P03886 318 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 VTNP04004 478 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 RPLP0P05388 317 aaKnown RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 YES1P07947 543 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ABCB1P08183 1280 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 SMIM10L2AP0DMW4 78 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 SMIM10L2BP0DMW5 78 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF37AP17032 561 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 TSPAN8P19075 237 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 PSMB9P28065 219 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 RRM2P31350 389 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GGT5P36269 586 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 MAP2K4P45985 399 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 TAF6P49848 677 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ARHGDIAP52565 204 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 CDKN2DP55273 166 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 OR2B6P58173 313 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 NRG1Q02297 640 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GPR50Q13585 617 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 GBX1Q14549 363 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 STARD3Q14849 445 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ARHGEF6Q15052 776 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 PON2Q15165 354 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 OR4D1Q15615 310 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 MAPK11Q15759 364 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 NKG7Q16617 165 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 TYSND1Q2T9J0 566 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 SV2CQ496J9 727 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 FBXO43Q4G163 708 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ATP6AP1LQ52LC2 224 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 YIF1BQ5BJH7 314 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 COLEC12Q5KU26 742 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 ATAD3CQ5T2N8 411 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 AFMIDQ63HM1 303 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 LAIR1Q6GTX8 287 aa4.09□□□□□ -1.76
PTP4A1-205ENST00000626021 SPESP1Q6UW49 350 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms