RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LRRC4CQ9HCJ2 640 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SARS2Q9NP81 518 aaKnown RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SMYD2Q9NRG4 433 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 THSD1Q9NS62 852 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 FGFR1OP2Q9NVK5 253 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ZDHHC3Q9NYG2 299 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SCHIP1Q9P0W5 487 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TAAR2Q9P1P5 351 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GALPQ9UBC7 116 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TBC1D29Q9UFV1 150 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 BAIAP2L1Q9UHR4 511 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ZNHIT2Q9UHR6 403 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 RABGEF1Q9UJ41 708 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CRLS1Q9UJA2 301 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KCNK6Q9Y257 313 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 WDR37Q9Y2I8 494 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 MED16Q9Y2X0 877 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GPSM3Q9Y4H4 160 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 LRRC42Q9Y546 428 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PCDHGA7Q9Y5G6 932 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 MAD1L1Q9Y6D9 718 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SLC30A1Q9Y6M5 507 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 RPS6KL1Q9Y6S9 549 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PTPRBP23467 1997 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TRBV23OR9-2A0A075B6M9 112 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 C17orf113A0A1B0GUU1 675 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TRABD2BA6NFA1 517 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 IQCF5A8MTL0 148 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CXorf49A8MYA2 514 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CFAP99D6REC4 459 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TK2O00142 265 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 GPR37O15354 613 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NVLO15381 856 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 BIRC5O15392 142 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CD3EAPO15446 510 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TYROBPO43914 113 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 POP7O75817 140 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 KRT38O76015 456 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 USP1O94782 785 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 UBOX5O94941 541 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SNUPNO95149 360 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ANP32DO95626 131 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CPNE6O95741 557 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 S1PR4O95977 384 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TOP3BO95985 862 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MT-ND3P03897 115 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ITGA2BP08514 1039 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ERVK-10P10266 1014 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SPTBP11277 2137 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF7P17097 686 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ITGB6P18564 788 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PGAM1P18669 254 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 XRCC1P18887 633 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MSH3P20585 1137 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CALB2P22676 271 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NDUFS1P28331 727 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 RBMS1P29558 406 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PBLDP30039 288 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PRLHRP49683 370 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PGGT1BP53609 377 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MAZP56270 477 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 RAB15P59190 212 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NCALDP61601 193 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MPP1Q00013 466 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SLC18A2Q05940 514 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 DMPKQ09013 629 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PDIA2Q13087 525 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TARDBPQ13148 414 aaKnown RBP eCLIP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NAB1Q13506 487 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SPIDRQ14159 915 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NFE2L1Q14494 772 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ZKSCAN8Q15776 578 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ISXQ2M1V0 245 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TYSND1Q2T9J0 566 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 BCL7AQ4VC05 210 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 HSP90AA5PQ58FG0 334 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PERM1Q5SV97 790 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 C6orf163Q5TEZ5 329 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 HES3Q5TGS1 186 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 LYPLAL1Q5VWZ2 237 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NEPROQ6NW34 567 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CASC4Q6P4E1 433 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 GUSBP11Q6P575 273 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF549Q6P9A3 640 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 DHRS13Q6UX07 377 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CERS6Q6ZMG9 384 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TIFABQ6ZNK6 161 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 LRRC69Q6ZNQ3 347 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TAS2R42Q7RTR8 314 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TBC1D1Q86TI0 1168 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SLC9B2Q86UD5 537 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 BPHLQ86WA6 291 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TRAPPC5Q8IUR0 188 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 LMNTD2Q8IXW0 634 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SRRM1Q8IYB3 904 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 NAGSQ8N159 534 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SFRP1Q8N474 314 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ENDOVQ8N8Q3 282 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms