RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ARHGAP6O43182 974 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 PDGFAP04085 211 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 CCR7P32248 378 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 SHMT2P34897 504 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 RPS15P62841 145 aaKnown RBP21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 CCNG2Q16589 344 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 SYTL3Q4VX76 610 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 TCTN3Q6NUS6 607 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 FAM198BQ6UWH4 519 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 LDB1Q86U70 411 aaPredicted RBP21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 VRK3Q8IV63 474 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 CCDC89Q8N998 374 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 OR6P1Q8NGX9 317 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 ADAMTS17Q8TE56 1095 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 CHRAC1Q9NRG0 131 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 PLAGL1Q9UM63 463 aa21.49■■□□□ 1.03
NEDD4L-237ENST00000617539 IQCF5A8MTL0 148 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 H3BMH7 237 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 MKRN2OSH3BPM6 223 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 CHRM5P08912 532 aaPredicted RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 CYP2A7P20853 494 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 PEBP1P30086 187 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 GABRA4P48169 554 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 CSE1LP55060 971 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 CRADDP78560 199 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 DRICH1Q6PGQ1 229 aaPredicted RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 ZNF662Q6ZS27 426 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 SYTL1Q8IYJ3 562 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 SLC22A15Q8IZD6 547 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 ENDOVQ8N8Q3 282 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 C19orf47Q8N9M1 422 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 PEX13Q92968 403 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 CLIP3Q96DZ5 547 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 ACTR5Q9H9F9 607 aaPredicted RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 LZTFL1Q9NQ48 299 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 EIF2B3Q9NR50 452 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 TDRKHQ9Y2W6 561 aaKnown RBP21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 SEC16AO15027 2179 aa21.48■■□□□ 1.03
NEDD4L-237ENST00000617539 NBASA2RRP1 2371 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 GOLGA6L6A8MZA4 724 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 KLK3P07288 261 aaPredicted RBP21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 CTSBP07858 339 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 ITGA1P56199 1179 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 PRAMEP78395 509 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 CHAF1BQ13112 559 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 PTCHD3Q3KNS1 767 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 ZNF385CQ66K41 422 aaPredicted RBP21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 NLRP9Q7RTR0 991 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 THAP4Q8WY91 577 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 SEC14L1Q92503 715 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 MENTQ9BUN1 341 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 AP1M1Q9BXS5 423 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 TREX1Q9NSU2 369 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 OR6C2Q9NZP2 312 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 POLG2Q9UHN1 485 aa21.47■■□□□ 1.03
NEDD4L-237ENST00000617539 ZNF749O43361 778 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 GPC4O75487 556 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 RAB40ALP0C0E4 278 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 SESN2P58004 480 aaPredicted RBP21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 FOXK1P85037 733 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 PLOD1Q02809 727 aaPredicted RBP21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 IGFBP7Q16270 282 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 DEFB110Q30KQ9 67 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 FASTKD1Q53R41 847 aaKnown RBP21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 PPHLN1Q8NEY8 458 aaKnown RBP21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 NLNQ9BYT8 704 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 SERTAD3Q9UJW9 196 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 TCFL5Q9UL49 500 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 DRG1Q9Y295 367 aaKnown RBP21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 CCDC88CQ9P219 2028 aa21.46■■□□□ 1.03
NEDD4L-237ENST00000617539 E7EQ34 232 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 FGGP02679 453 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 PKLRP30613 574 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 PTGIRP43119 386 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 KCNJ1P48048 391 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 HSPA14Q0VDF9 509 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 KLRB1Q12918 225 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 GRB7Q14451 532 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 PCID2Q5JVF3 399 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 ASB18Q6ZVZ8 466 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 KRT222Q8N1A0 295 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 LMNTD1Q8N9Z9 388 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 LINC01555Q8NAE3 123 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 TCTN2Q96GX1 697 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 TTC1Q99614 292 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 CARD6Q9BX69 1037 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 CHRNA10Q9GZZ6 450 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 CATSPERZQ9NTU4 200 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 ZKSCAN5Q9Y2L8 839 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 PTPN13Q12923 2485 aa21.45■■□□□ 1.02
NEDD4L-237ENST00000617539 A0A0J9YY10 115 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 ARGFXA6NJG6 315 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 MAP3K7O43318 606 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 CCDC175P0C221 793 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 AOAHP28039 575 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 NMBRP28336 390 aa21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 BASP1P80723 227 aaKnown RBP21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 DNAJC21Q5F1R6 531 aaKnown RBP21.44■■□□□ 1.02
NEDD4L-237ENST00000617539 FAM20CQ8IXL6 584 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms