RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TUBA1CQ9BQE3 449 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 MGME1Q9BQP7 344 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 THUMPD2Q9BTF0 503 aaKnown RBP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 CCDC106Q9BWC9 280 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 HEMGNQ9BXL5 484 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 TRIM7Q9C029 511 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 CCSER1Q9C0I3 900 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 ANKRD2Q9GZV1 360 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 OSGEPL1Q9H4B0 414 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 XKR8Q9H6D3 395 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 EVA1AQ9H8M9 152 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 SERINC1Q9NRX5 453 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 IARS2Q9NSE4 1012 aaKnown RBP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 QPCTLQ9NXS2 382 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 MPP6Q9NZW5 540 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 HCN3Q9P1Z3 774 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 MALT1Q9UDY8 824 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 OSGIN1Q9UJX0 560 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 ANAPC2Q9UJX6 822 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 INTS6Q9UL03 887 aaKnown RBP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 CDH7Q9ULB5 785 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 MTMR6Q9Y217 621 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 VDAC3Q9Y277 283 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 RPH3AQ9Y2J0 694 aaPredicted RBP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 CLCA3PQ9Y6N3 262 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 MROH5Q6ZUA9 1318 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 ATXN2Q99700 1313 aaKnown RBP2.56□□□□□ -2
HMGB1P24-202ENST00000615653 KDM3AQ9Y4C1 1321 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 TMEM94Q12767 1356 aa2.56□□□□□ -2
HMGB1P24-202ENST00000615653 FAM237BA0A1B0GVD1 139 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TCRBV21S2A2A0A5A6 115 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 HTR3EA5X5Y0 456 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 OOEPA6NGQ2 149 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 OR6C76A6NM76 312 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 EIF3CLB5ME19 914 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PRAC2D3DTV9 90 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 KLRF2D3W0D1 207 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 NPIPB11E5RHQ5 1161 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 J3KR12 359 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 E2F3O00716 465 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 IFIT3O14879 490 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CASC3O15234 703 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TNFSF14O43557 240 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SSX5O60225 188 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RANBP6O60518 1105 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CYTIPO60759 359 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 DIAPH2O60879 1101 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RFPL2O75678 378 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CIB2O75838 187 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RGS11O94810 467 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 NSD2O96028 1365 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 IGLV2-11P01706 119 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ASGR1P07306 291 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TUBBP07437 444 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 UMODP07911 640 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 LINC00271P0C7V0 271 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 DLATP10515 647 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RARGP13631 454 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CCDC130P13994 396 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PRLRP16471 622 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ITGAXP20702 1163 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CDH3P22223 829 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 POU1F1P28069 291 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CCND2P30279 289 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CORO1AP31146 461 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 HNRNPH1P31943 449 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 CCR10P46092 362 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RAB28P51157 221 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 MFAP4P55083 255 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 KIAA1024LP59773 190 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 PSMC6P62333 389 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TUBB4BP68371 445 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ASIC1P78348 528 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 OLR1P78380 273 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 MRPS5P82675 430 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 RELQ04864 619 aaPredicted RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SPAG1Q07617 926 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TRDNQ13061 729 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TUBB2AQ13885 445 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 BAATQ14032 418 aaPredicted RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 GAMTQ14353 236 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 NEDD9Q14511 834 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 STK11Q15831 433 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 HADHQ16836 314 aaKnown RBP2.55□□□□□ -2
HMGB1P24-202ENST00000615653 HYAL4Q2M3T9 481 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SOWAHAQ2M3V2 549 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 KRTAP24-1Q3LI83 254 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 DPCR1Q3MIW9 517 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ACCSLQ4AC99 568 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ZRANB3Q5FWF4 1079 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 FBXO48Q5FWF7 155 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SERTAD4-AS1Q5TG53 156 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SFMBT2Q5VUG0 894 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SHEQ5VZ18 495 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 TMEM270Q6UE05 265 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 MFSD7Q6UXD7 560 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 ZYG11AQ6WRX3 759 aa2.55□□□□□ -2
HMGB1P24-202ENST00000615653 SLC36A4Q6YBV0 504 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms