RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SLC30A3Q99726 388 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 C2orf49Q9BVC5 232 aaPredicted RBP10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CEP44Q9C0F1 390 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LHPPQ9H008 270 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 RIC8BQ9NVN3 520 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SLAMF8Q9P0V8 285 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PCDHGA3Q9Y5H0 932 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 FAM234BA2RU67 622 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SUPT3HB4E1H0 165 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CDC7O00311 574 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 XPNPEP2O43895 674 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ACPPP15309 386 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 VBP1P61758 197 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GRB7Q14451 532 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 INPP5AQ14642 412 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TBPL2Q6SJ96 375 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MILR1Q7Z6M3 343 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 EPHX4Q8IUS5 362 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CADM3Q8N126 398 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TRPC4APQ8TEL6 797 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZFP90Q8TF47 636 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MYO19Q96H55 970 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ABCG8Q9H221 673 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ATAD3AQ9NVI7 634 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GALPQ9UBC7 116 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GNPTGQ9UJJ9 305 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 INVSQ9Y283 1065 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CCL27Q9Y4X3 112 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PCDHGC4Q9Y5F7 938 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 IGLV3-16A0A075B6K0 115 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TRIM64A6NGJ6 449 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TBL1XO60907 577 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 KRT75O95678 551 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GPIP06744 558 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZNF7P17097 686 aaPredicted RBP10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CAPN3P20807 821 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AGXTP21549 392 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SLC6A2P23975 617 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 INAQ16352 499 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MPPE1Q53F39 396 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 UBE2UQ5VVX9 321 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.715e-14■■■■■ 30.9
SENP3-EIF4A1-201ENST00000614237 SLC22A16Q86VW1 577 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 RASGRP3Q8IV61 690 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SYTL1Q8IYJ3 562 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 RBFAQ8N0V3 343 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 EEF1AKMT1Q8WVE0 214 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SNX19Q92543 992 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TFAP2CQ92754 450 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NSUN5Q96P11 429 aaKnown RBP10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HTATIP2Q9BUP3 242 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GIN1Q9NXP7 522 aa10.64□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PTPRSQ13332 1948 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRSS56P0CW18 603 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TCF3P15923 654 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ACRV1P26436 265 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TIGD2Q4W5G0 525 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GPRC6AQ5T6X5 926 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 GPRIN3Q6ZVF9 776 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ERMP1Q7Z2K6 904 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TMC8Q8IU68 726 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CCDC103Q8IW40 242 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TMEM125Q96AQ2 219 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PPM1MQ96MI6 270 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DACH2Q96NX9 599 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MCCC1Q96RQ3 725 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NTMT1Q9BV86 223 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 C6orf62Q9GZU0 229 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TRIM39Q9HCM9 518 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 KIAA1522Q9P206 1035 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NPEPPSL1A6NEC2 478 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 H0Y626 953 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NME4O00746 187 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HOXB6P17509 224 aaKnown RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PRPH2P23942 346 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HTR1EP28566 365 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 MZF1P28698 734 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 CDKN1CP49918 316 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TWF1Q12792 350 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 THOC7Q6I9Y2 204 aaKnown RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 NEK10Q6ZWH5 1172 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 PAGE2Q7Z2X7 111 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SIDT2Q8NBJ9 832 aaKnown RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 DNAJB8Q8NHS0 232 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 LINGO1Q96FE5 620 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 HGH1Q9BTY7 390 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TOR3AQ9H497 397 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AMBNQ9NP70 447 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 SEMA4BQ9NPR2 832 aaPredicted RBP10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ZNF639Q9UID6 485 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 AP3M1Q9Y2T2 418 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 ASPDHA6ND91 283 aa10.63□□□□□ -0.71
SENP3-EIF4A1-201ENST00000614237 TRIM64CA6NLI5 447 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms