RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 FGFBP3Q8TAT2 258 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 IRGQQ8WZA9 623 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 KIFC3Q9BVG8 833 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 ARRDC1-AS1Q9H2J1 176 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 OSGEPL1Q9H4B0 414 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 SDR39U1Q9NRG7 319 aaPredicted RBP3.85□□□□□ -1.79
HDDC2-207ENST00000608532 TUBE1Q9UJT0 475 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 MTUS1Q9ULD2 1270 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 GRIP1Q9Y3R0 1128 aa3.85□□□□□ -1.79
HDDC2-207ENST00000608532 ANKRD61A6NGH8 418 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 KLF11O14901 512 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 MOCS3O95396 460 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 ZNF10P21506 573 aaPredicted RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 ACSL1P33121 698 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 NRIP1P48552 1158 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 GEMIN4P57678 1058 aaKnown RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 SNX16P57768 344 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 E2F5Q15329 346 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 KLHL26Q53HC5 615 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 PLEKHS1Q5SXH7 462 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 DHRS7BQ6IAN0 325 aaPredicted RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 PSRC1Q6PGN9 363 aaPredicted RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 PAPD5Q8NDF8 572 aaKnown RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 MOCOSQ96EN8 888 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 AGAP3Q96P47 875 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 NEK1Q96PY6 1258 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 URM1Q9BTM9 101 aaKnown RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 CLEC7AQ9BXN2 247 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 TAB2Q9NYJ8 693 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 B3GAT1Q9P2W7 334 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 ADD3Q9UEY8 706 aaKnown RBP3.84□□□□□ -1.79
HDDC2-207ENST00000608532 EPHA6Q9UF33 1036 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 LRWD1Q9UFC0 647 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 SMAD5-AS1Q9Y6J3 95 aa3.84□□□□□ -1.79
HDDC2-207ENST00000608532 ANKUB1A6NFN9 424 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 AGAP14A8MT82 685 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 E9PQ18 207 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 ZNF195O14628 629 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 DCXO43602 365 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 TSPAN1O60635 241 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 MED24O75448 989 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 GJB3O75712 270 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 ZFAND5O76080 213 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 GPIP06744 558 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 CA6P23280 308 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 SLC6A6P31641 620 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 RXRGP48443 463 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 RGS19P49795 217 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 NAP1L1P55209 391 aaKnown RBP3.83□□□□□ -1.8
HDDC2-207ENST00000608532 CHAF1BQ13112 559 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 SQLEQ14534 574 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 NR1D2Q14995 579 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 FAAP20Q6NZ36 180 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 TEX38Q6PEX7 206 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 TMEM173Q86WV6 379 aaPredicted RBP3.83□□□□□ -1.8
HDDC2-207ENST00000608532 CEP57Q86XR8 500 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 CEP57L1Q8IYX8 460 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 EID3Q8N140 333 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 NIPA2Q8N8Q9 360 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 ARHGAP45Q92619 1136 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 CALML4Q96GE6 196 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 BTBD10Q9BSF8 475 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 FUCA2Q9BTY2 467 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 GHITMQ9H3K2 345 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 BLOC1S4Q9NUP1 217 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 RNF186Q9NXI6 227 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 PSD3Q9NYI0 1048 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 WDR37Q9Y2I8 494 aa3.83□□□□□ -1.8
HDDC2-207ENST00000608532 ZNF644Q9H582 1327 aaPredicted RBP3.83□□□□□ -1.8
HDDC2-207ENST00000608532 MEIS2O14770 477 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 ADAMDEC1O15204 470 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 TSPAN9O75954 239 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 CLDN1O95832 211 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 SAT1P21673 171 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 DNASE1P24855 282 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 ITPRIPL2Q3MIP1 535 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 ITPRIPL1Q6GPH6 555 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 TRIM65Q6PJ69 517 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 PTAR1Q7Z6K3 402 aaPredicted RBP3.82□□□□□ -1.8
HDDC2-207ENST00000608532 LACC1Q8IV20 430 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 TAGAPQ8N103 731 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 LSMEM2Q8N112 164 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 DYRK2Q92630 601 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 FNBP1Q96RU3 617 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 OLFM1Q99784 485 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 DGCR6LQ9BY27 220 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 MMP27Q9H306 513 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 WSB2Q9NYS7 404 aaPredicted RBP3.82□□□□□ -1.8
HDDC2-207ENST00000608532 TBC1D29Q9UFV1 150 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 DAPK2Q9UIK4 370 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 VPS28Q9UK41 221 aa3.82□□□□□ -1.8
HDDC2-207ENST00000608532 A8MV72 311 aaPredicted RBP3.81□□□□□ -1.8
HDDC2-207ENST00000608532 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.81□□□□□ -1.8
HDDC2-207ENST00000608532 RNASEH1O60930 286 aaKnown RBP3.81□□□□□ -1.8
HDDC2-207ENST00000608532 CSH1P0DML2 217 aa3.81□□□□□ -1.8
HDDC2-207ENST00000608532 CSH2P0DML3 217 aa3.81□□□□□ -1.8
HDDC2-207ENST00000608532 TRIM21P19474 475 aaKnown RBP3.81□□□□□ -1.8
HDDC2-207ENST00000608532 HOXD13P35453 343 aa3.81□□□□□ -1.8
HDDC2-207ENST00000608532 RPL21P46778 160 aaKnown RBP3.81□□□□□ -1.8
HDDC2-207ENST00000608532 SLC9A3P48764 834 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms