RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ATP6V0D1P61421 351 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 SLC18A2Q05940 514 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 BNIP3Q12983 259 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 PLA2G4EQ3MJ16 856 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 C6orf132Q5T0Z8 1188 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 IYDQ6PHW0 289 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 SLC30A9Q6PML9 568 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 UNC5DQ6UXZ4 953 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 CMC1Q7Z7K0 106 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 CLEC14AQ86T13 490 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 VRK3Q8IV63 474 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 RBM12BQ8IXT5 1001 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 CPNE9Q8IYJ1 553 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 SFRP1Q8N474 314 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 LILRA3Q8N6C8 439 aaPredicted RBP11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 OR4C6Q8NH72 309 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 ASB11Q8WXH4 323 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 SLC39A7Q92504 469 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 ALKBH8Q96BT7 664 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 SARS2Q9NP81 518 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 UCKL1Q9NWZ5 548 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 MKS1Q9NXB0 559 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 NCKIPSDQ9NZQ3 722 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 TBK1Q9UHD2 729 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 DNAJC16Q9Y2G8 782 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 ACOT9Q9Y305 439 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 UNC13CQ8NB66 2214 aa11.36□□□□□ -0.59
CHMP2A-207ENST00000600804 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PHGDHO43175 533 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PSIP1O75475 530 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 RFPL3O75679 317 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 SASH3O75995 380 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 KLHL2O95198 593 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 RPN2P04844 631 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 C8GP07360 202 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 CELA2BP08218 269 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 GSTA1P08263 222 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 LTA4HP09960 611 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 ALPPL2P10696 532 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 XRCC1P18887 633 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 KRT15P19012 456 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 HALP42357 657 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 FASLGP48023 281 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PREPP48147 710 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 TARDBPQ13148 414 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 SP140Q13342 867 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 C1orf61Q13536 156 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 CLCA4Q14CN2 919 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 FAM83EQ2M2I3 478 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 TSNAXIP1Q2TAA8 658 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 INAVAQ3KP66 663 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 HES3Q5TGS1 186 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 ZCCHC8Q6NZY4 707 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 RAPH1Q70E73 1250 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 CENPLQ8N0S6 344 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 MYO1HQ8N1T3 1032 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 EID2Q8N6I1 236 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 FAM46DQ8NEK8 389 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 GPR156Q8NFN8 814 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 RHEBL1Q8TAI7 183 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 ZDHHC1Q8WTX9 485 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 EEF1AKMT1Q8WVE0 214 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 TFGQ92734 400 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 FAM136AQ96C01 138 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 CNDP2Q96KP4 475 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 RMDN2Q96LZ7 410 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 FOPNLQ96NB1 174 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 GPR78Q96P69 363 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 ACBD3Q9H3P7 528 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 OSGEPL1Q9H4B0 414 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 MVB12BQ9H7P6 319 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 UCK1Q9HA47 277 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 NMRAL1Q9HBL8 299 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 TMBIM4Q9HC24 238 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 SSU72Q9NP77 194 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 POT1Q9NUX5 634 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 WDR37Q9Y2I8 494 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PCDHGA1Q9Y5H4 931 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PTPN13Q12923 2485 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 PCM1Q15154 2024 aa11.35□□□□□ -0.59
CHMP2A-207ENST00000600804 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 EIF4E1BA6NMX2 242 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 PDZK1P1A8MUH7 402 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 OPA1O60313 960 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 NOBOXO60393 691 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 SDC3O75056 442 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 EML2O95834 649 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ENO2P09104 434 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 CCDC166P0CW27 439 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 MTHFD1P11586 935 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 CD1DP15813 335 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 SAT1P21673 171 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 RPL10P27635 214 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms