RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ACTL8Q9H568 366 aa17.35■□□□□ 0.37
CHMP2A-203ENST00000597209 FARSAQ9Y285 508 aaKnown RBP17.35■□□□□ 0.37
CHMP2A-203ENST00000597209 CDC14CA4D256 554 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 TMEM150CB9EJG8 249 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 MEN1O00255 615 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 SLCO2B1O94956 709 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 APOA4P06727 396 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 CHRM5P08912 532 aaPredicted RBP17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 RAB40ALP0C0E4 278 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 UGT2B7P16662 529 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 RPS3P23396 243 aaKnown RBP eCLIP17.34■□□□□ 0.373e-6■■■□□ 16.9
CHMP2A-203ENST00000597209 CXCR5P32302 372 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 RORAP35398 523 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 MAGEA6P43360 314 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 ABRQ12979 859 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 HOOK3Q86VS8 718 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 RASGEF1CQ8N431 466 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 FLVCR1-AS1Q8TAF5 88 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 MR1Q95460 341 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 ABHD17AQ96GS6 310 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 TCTN2Q96GX1 697 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 P2RY12Q9H244 342 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 MARCH4Q9P2E8 410 aaPredicted RBP17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 TDRKHQ9Y2W6 561 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 TLN1Q9Y490 2541 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 JRKLQ9Y4A0 524 aa17.34■□□□□ 0.37
CHMP2A-203ENST00000597209 RPN2P04844 631 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 HBQ1P09105 142 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 PVRP15151 417 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 AOAHP28039 575 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 NMBRP28336 390 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 ITGA1P56199 1179 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 CRADDP78560 199 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 NFKB2Q00653 900 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 HSPA14Q0VDF9 509 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 KIR2DS3Q14952 304 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 KYNUQ16719 465 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 UGT8Q16880 541 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 SLC5A12Q1EHB4 618 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 UNC5DQ6UXZ4 953 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 CDHR3Q6ZTQ4 885 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 LDB1Q86U70 411 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 APLFQ8IW19 511 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 C19orf47Q8N9M1 422 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 LKAAEAR1Q8TD35 194 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 THAP4Q8WY91 577 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 PBKQ96KB5 322 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 RUFY1Q96T51 708 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 ACTR5Q9H9F9 607 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 SPHK1Q9NYA1 384 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 GNPTGQ9UJJ9 305 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 TTC7AQ9ULT0 858 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 SOX13Q9UN79 622 aa17.33■□□□□ 0.36
CHMP2A-203ENST00000597209 A0A0J9YY10 115 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 IQCF5A8MTL0 148 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 E7EQ34 232 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 KPNA5O15131 536 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 WISP1O95388 367 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 CYP2A7P20853 494 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 MGAT1P26572 445 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 ARNTP27540 789 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 GABRA4P48169 554 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 RAB28P51157 221 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 PMS2P54278 862 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 KCNJ11Q14654 390 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 TMED2Q15363 201 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 PRAMEF17Q5VTA0 474 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 PTRHD1Q6GMV3 140 aaKnown RBP17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 VRK3Q8IV63 474 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 CLIP3Q96DZ5 547 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 DPH2Q9BQC3 489 aaPredicted RBP17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 CHST8Q9H2A9 424 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 PCMTD2Q9NV79 361 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 SYBUQ9NX95 663 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 ANAPC2Q9UJX6 822 aa17.32■□□□□ 0.36
CHMP2A-203ENST00000597209 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 H3BMH7 237 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MKRN2OSH3BPM6 223 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 NDUFS3O75489 264 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 PKLRP30613 574 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 CSE1LP55060 971 aaKnown RBP17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MRNIPQ6NTE8 343 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 SDCCAG8Q86SQ7 713 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 TMEM135Q86UB9 458 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 DCUN1D3Q8IWE4 304 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 KRT222Q8N1A0 295 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MFSD3Q96ES6 412 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 TCF12Q99081 682 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MENTQ9BUN1 341 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 NLNQ9BYT8 704 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 KLHL25Q9H0H3 589 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 FAM60AQ9NP50 221 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MAN2B2Q9Y2E5 1009 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 MRFAP1Q9Y605 127 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 AP1M2Q9Y6Q5 423 aa17.31■□□□□ 0.36
CHMP2A-203ENST00000597209 BSNQ9UPA5 3926 aa17.3■□□□□ 0.36
CHMP2A-203ENST00000597209 ISM1B1AKI9 464 aa17.3■□□□□ 0.36
CHMP2A-203ENST00000597209 PFDN6O15212 129 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms