RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 TRAPPC9Q96Q05 1148 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 OR2A14Q96R47 310 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 OSBPL9Q96SU4 736 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 EFHD1Q9BUP0 239 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 TUBB2BQ9BVA1 445 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 KIFC1Q9BW19 673 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 PITPNM3Q9BZ71 974 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 IL22Q9GZX6 179 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 TWSG1Q9GZX9 223 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 P2RY12Q9H244 342 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 MRM3Q9HC36 420 aaKnown RBP5.67□□□□□ -1.5
SSX4B-201ENST00000595235 LHX9Q9NQ69 397 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 C1GALT1Q9NS00 363 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 SPHK1Q9NYA1 384 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 IL1RAPL1Q9NZN1 696 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 BFARQ9NZS9 450 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 CIDEBQ9UHD4 219 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 SOX13Q9UN79 622 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 TDRKHQ9Y2W6 561 aaKnown RBP5.67□□□□□ -1.5
SSX4B-201ENST00000595235 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 JRKLQ9Y4A0 524 aa5.67□□□□□ -1.5
SSX4B-201ENST00000595235 DSPP15924 2871 aaKnown RBP5.67□□□□□ -1.5
SSX4B-201ENST00000595235 CHD6Q8TD26 2715 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 KRT87PA6NCN2 255 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 USP27XA6NNY8 438 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 B8ZZF3 427 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TMEM150CB9EJG8 249 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GOLGA8MH3BSY2 632 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PGRMC1O00264 195 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 MATN2O00339 956 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PRMT5O14744 637 aaPredicted RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CPNE3O75131 537 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 NIPSNAP2O75323 286 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 KATNA1O75449 491 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 SLCO2B1O94956 709 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 VAPBO95292 243 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CTSBP07858 339 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TCN2P20062 427 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 RPS3P23396 243 aaKnown RBP eCLIP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 AOAHP28039 575 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PKLRP30613 574 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 RORAP35398 523 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 COILP38432 576 aaPredicted RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 BDKRB1P46663 353 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GABRA4P48169 554 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TTPAP49638 278 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 EIF3BP55884 814 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CDK16Q00536 496 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 HSPA14Q0VDF9 509 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 ERV3-1Q14264 604 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GRB7Q14451 532 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TYSND1Q2T9J0 566 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 DEFB110Q30KQ9 67 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 DEFB109BQ30KR1 87 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 DNAJC21Q5F1R6 531 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 AARS2Q5JTZ9 985 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PLEKHS1Q5SXH7 462 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TMTC4Q5T4D3 741 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PTRHD1Q6GMV3 140 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 KIAA0930Q6ICG6 404 aaPredicted RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CCDC137Q6PK04 289 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 SPESP1Q6UW49 350 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CDHR3Q6ZTQ4 885 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 ZNF605Q86T29 641 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TAX1BP1Q86VP1 789 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 BPHLQ86WA6 291 aaPredicted RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TMEM126BQ8IUX1 230 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 FAM20CQ8IXL6 584 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 OTUD6BQ8N6M0 293 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 NAT8LQ8N9F0 302 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 C19orf47Q8N9M1 422 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 LINC01555Q8NAE3 123 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 OR1L3Q8NH93 324 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CFAP61Q8NHU2 1237 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 LPGAT1Q92604 370 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 BIRC8Q96P09 236 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CATSPER2Q96P56 530 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 IL17FQ96PD4 163 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 FCRL4Q96PJ5 515 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TTC1Q99614 292 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 MENTQ9BUN1 341 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 CARD6Q9BX69 1037 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 ACTL8Q9H568 366 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 FAM60AQ9NP50 221 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 KCND1Q9NSA2 647 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 HOMER3Q9NSC5 361 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 STARD5Q9NSY2 213 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GEMIN8Q9NWZ8 242 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 TRMT1Q9NXH9 659 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GALPQ9UBC7 116 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 POLG2Q9UHN1 485 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 GNPTGQ9UJJ9 305 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 ANAPC5Q9UJX4 755 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PADI1Q9ULC6 663 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 RUVBL2Q9Y230 463 aaKnown RBP5.66□□□□□ -1.5
SSX4B-201ENST00000595235 PCDHGA6Q9Y5G7 932 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 NFS1Q9Y697 457 aa5.66□□□□□ -1.5
SSX4B-201ENST00000595235 SNRNP200O75643 2136 aaKnown RBP5.65□□□□□ -1.5
SSX4B-201ENST00000595235 A0A0J9YY10 115 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms