RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SNAP47Q5SQN1 464 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 ZC3HC1Q86WB0 502 aaKnown RBP25.01■■□□□ 1.59
TRIM28-204ENST00000594806 KMT5CQ86Y97 462 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 RAB42Q8N4Z0 105 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 NDNQ99608 321 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 CPNE1Q99829 537 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 RHOJQ9H4E5 214 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 THSD1Q9NS62 852 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 SLC17A6Q9P2U8 582 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 ACACBO00763 2458 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 TLCD2A6NGC4 264 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 A8MU76 341 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 B4E171 279 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 BRINP1O60477 761 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 C1orf105O95561 183 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 PHBP35232 272 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 TSPAN7P41732 249 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 TUBB4BP68371 445 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 RBM20Q5T481 1227 aaKnown RBP25■■□□□ 1.59
TRIM28-204ENST00000594806 HECTD2Q5U5R9 776 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 CACHD1Q5VU97 1274 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 GPATCH11Q8N954 259 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 GIMAP7Q8NHV1 300 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 SLC30A3Q99726 388 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 ZNF768Q9H5H4 540 aaKnown RBP25■■□□□ 1.59
TRIM28-204ENST00000594806 KLHL3Q9UH77 587 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 ICKQ9UPZ9 632 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 PSAT1Q9Y617 370 aa25■■□□□ 1.59
TRIM28-204ENST00000594806 C2orf74A8MZ97 194 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 PSIP1O75475 530 aaKnown RBP24.99■■□□□ 1.59
TRIM28-204ENST00000594806 RASSF9O75901 435 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 TNFSF15O95150 251 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 CATP04040 527 aaKnown RBP24.99■■□□□ 1.59
TRIM28-204ENST00000594806 POLR2CP19387 275 aaPredicted RBP24.99■■□□□ 1.59
TRIM28-204ENST00000594806 FDXRP22570 491 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 ECHS1P30084 290 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 RAB28P51157 221 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 FOXR1Q6PIV2 292 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 EIF1ADQ8N9N8 165 aaKnown RBP24.99■■□□□ 1.59
TRIM28-204ENST00000594806 MDM1Q8TC05 714 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 KLHL6Q8WZ60 621 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 SMYD2Q9NRG4 433 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 PCDHGA7Q9Y5G6 932 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 CHD8Q9HCK8 2581 aa24.99■■□□□ 1.59
TRIM28-204ENST00000594806 BTN3A3O00478 584 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 RHOXF2BP0C7M4 288 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 CDKN2DP55273 166 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 TIAL1Q01085 375 aaKnown RBP eCLIP24.98■■□□□ 1.59
TRIM28-204ENST00000594806 PDAP1Q13442 181 aaKnown RBP24.98■■□□□ 1.59
TRIM28-204ENST00000594806 SLMAPQ14BN4 828 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 TBC1D25Q3MII6 688 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 TMEM164Q5U3C3 297 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 CYB5D1Q6P9G0 228 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 FAM92BQ6ZTR7 304 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 CLEC14AQ86T13 490 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 ADGRF3Q8IZF5 1079 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 FBXO15Q8NCQ5 510 aaPredicted RBP24.98■■□□□ 1.59
TRIM28-204ENST00000594806 FBF1Q8TES7 1133 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 RHOXF2Q9BQY4 288 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 MCMBPQ9BTE3 642 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 TWSG1Q9GZX9 223 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 ASCL3Q9NQ33 180 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 C1GALT1Q9NS00 363 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 PISDQ9UG56 409 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 POMT2Q9UKY4 750 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 SLC39A10Q9ULF5 831 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 NFS1Q9Y697 457 aa24.98■■□□□ 1.59
TRIM28-204ENST00000594806 ACACAQ13085 2346 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 PIPSLA2A3N6 862 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CDRT15L2A8MXV6 281 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 BTN3A1O00481 513 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 C1QAP02745 245 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 TPBGLP0DKB5 382 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 MCM3P25205 808 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 PKLRP30613 574 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 GP5P40197 560 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 RAB15P59190 212 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 GRB7Q14451 532 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CYHR1Q6ZMK1 362 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CTAGE3PQ8IX95 158 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CPNE9Q8IYJ1 553 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 ASB11Q8WXH4 323 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 ZCCHC14Q8WYQ9 949 aaKnown RBP24.97■■□□□ 1.59
TRIM28-204ENST00000594806 FGF11Q92914 225 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 VPS39Q96JC1 886 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CNTNAP3BQ96NU0 1288 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 TAAR9Q96RI9 348 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 MENTQ9BUN1 341 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 CNTNAP3Q9BZ76 1288 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 XKR8Q9H6D3 395 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 SPATA7Q9P0W8 599 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 LNPEPQ9UIQ6 1025 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 AKAP13Q12802 2813 aa24.97■■□□□ 1.59
TRIM28-204ENST00000594806 FAM95CA0A1B0GW59 222 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 GSAPA4D1B5 854 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 CXorf49A8MYA2 514 aaPredicted RBP24.96■■□□□ 1.59
TRIM28-204ENST00000594806 RASGRF2O14827 1237 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 NVLO15381 856 aaKnown RBP24.96■■□□□ 1.59
TRIM28-204ENST00000594806 ZBTB14O43829 449 aa24.96■■□□□ 1.59
TRIM28-204ENST00000594806 FGF3P11487 239 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms